Cycloclasticus sp. PY97N: CPC19_09365
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Entry
CPC19_09365 CDS
T05126
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cyy
Cycloclasticus sp. PY97N
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyy03400
]
CPC19_09365
Enzymes [BR:
cyy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CPC19_09365
DNA repair and recombination proteins [BR:
cyy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CPC19_09365
Prokaryotic type
CPC19_09365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ATI03662
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All DBs
Position
1933210..1934622
Genome browser
AA seq
470 aa
AA seq
DB search
MSAQHELVWFRNDLRTIDNPALYHACQSTQPVIAIYIATPQQWHQHDDAAVKLDFWHRNL
VQLEKELAELNIELHFFQHDNYQQIPDLIATICQQWAVNQVHVNAELAVNESQRDANVIE
RCQDIGVAYQEHHDQLLLPPASIRTKTGTPYKVFTAFSTQARQRLATPPSLYPVPNPCKK
ISDNATKRLSGQCQFADIHWPTVSKKIQTFWPAGQQQALTRLTEFCQQPIQHYKTDRDTP
SLAGTSRLSPYLASGILSAAQCWHATLHCEMSDGVHIWQNELLWREFYKHTLIDFPQVSK
HKPLKLQTEQIEWRHDKEQLAAWQNGKTGIPIVDAAMRQLLTRGWMHNRLRMIVAMFLTK
HLLIDWRLGERWFMQHLIDGDLSANNGGWQWCASTGSDSVPYFRIFNPVTQSQRFDPKGA
FIRHYLPELAHLSDKDIHLPSAKNRPENYPSPIVDLKRGRLRALSAFKGV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacagcatgaattagtttggtttcgtaatgatttgcgcaccattgataaccct
gcgctttaccatgcttgccaatcgacacagccggttattgcaatatatattgccacacca
caacaatggcatcagcatgatgatgctgcggtaaaactggacttttggcaccgcaatctc
gttcaacttgaaaaagagttagctgagctaaatattgaattgcacttttttcagcatgat
aactaccagcaaattcctgatttaatcgccactatttgtcagcagtgggctgtaaatcaa
gtgcacgttaacgcggagctggccgttaacgaaagtcaaagagatgcaaacgttattgaa
cgatgccaagacattggcgtggcctatcaagagcatcacgaccaattgctgcttccacca
gcaagtatacggactaaaaccggcacgccgtataaagtatttacagcgttttcaacacaa
gctcggcagcggcttgcgaccccgcctagcctctaccctgtacctaatccttgcaaaaaa
ataagcgacaacgcaacgaagaggttgagcggacagtgtcagtttgcagacatacactgg
ccaacggtttcaaaaaaaatacaaaccttttggcctgccggtcaacagcaagccttaact
cgattgactgaattttgtcagcagcctattcaacactacaaaaccgatagggatacgcca
tcgttagctggcaccagccgactttcgccgtatctagccagtggaatactctccgctgca
caatgttggcacgcaaccttgcattgtgaaatgagtgatggcgtacatatttggcaaaac
gaattgctgtggcgtgaattttataaacacaccctgattgattttccgcaagtgtctaaa
cataagcccttgaagctgcaaacagagcagattgaatggcgacatgataaagagcaatta
gcggcatggcagaacggtaaaacgggaatccccattgttgatgcagccatgcggcagcta
ttaacaagggggtggatgcataaccgtttgcggatgatagtggctatgtttttaacgaaa
catttattgatagactggcgcttaggtgagcgttggtttatgcaacatttaattgatggt
gatctgtcggcaaacaatgggggctggcaatggtgtgcctcaacaggctctgattcggtg
ccttactttagaatttttaatccggtcactcaatcacaacggtttgatccaaagggtgct
tttattcgccattacctgccagagctggcacacttatcagataaagacattcatttaccc
agcgccaagaatagaccggagaattaccctagcccgattgttgatttaaagcggggtcgc
ttaagagcgctgtctgcttttaaaggtgtatag
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