Cycloclasticus sp. PY97N: CPC19_11650
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Entry
CPC19_11650 CDS
T05126
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cyy
Cycloclasticus sp. PY97N
Pathway
cyy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cyy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CPC19_11650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cyy02022
]
CPC19_11650
02035 Bacterial motility proteins [BR:
cyy02035
]
CPC19_11650
Two-component system [BR:
cyy02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CPC19_11650
Bacterial motility proteins [BR:
cyy02035
]
Pilus system
Twitching motility proteins
CPC19_11650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
HTH_30
AAA
AAA_22
HTH_50
Motif
Other DBs
NCBI-ProteinID:
ATI04091
LinkDB
All DBs
Position
2396674..2398044
Genome browser
AA seq
456 aa
AA seq
DB search
MPQTLALIVDDEPDILELLEITLSRMGIASKPAHDLSEAKLLLKTHSFDICLTDLQLPDG
NGLELVTHVQTHYPSTPTAVITAFGSMEVAIKALKLGAFDFVSKPVDLKSLKNLVSSAIK
INDTVEPVDRRSRDQLLGDSVMMANVRAKIAKLARSQAPIYISGESGTGKELVAKLIHEK
GPRANQAFVPINCGAIPHELMESEFFGHKKGSFTGAIADKKGLFQLAHGGTLFLDEIADL
PLHMQVKLLRAIQEKSIRPIGSDTETVIDTRILCATHKNLSELVEKGSFRQDLYYRINVI
ELPLPALRERKEDIQQLATHILQKLNTEHGNTTISLSENALKALTKYPFPGNVRELENIL
ERAFTLCENGLIHQADLQLPENPHNIPNSINTPASSPNASDESSDAPLEDYLGTLEKEAI
VNALEKTRWNKTAAAKDLGITFRALRYRLKKLGLDT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaaacactcgcccttattgtcgacgatgaaccagacattttagagttactggaa
atcaccctgtctcgcatgggcatcgccagtaaaccagcacacgaccttagcgaagctaag
ctgcttttaaagacccactcttttgatatttgcctaaccgacctgcaattaccagacggt
aacggcttagagctggttacgcacgtacaaacacactaccccagcacacccaccgctgtt
attaccgcttttggcagtatggaagttgctatcaaagccctcaagctgggtgcctttgat
tttgtttccaaaccggttgacttaaaaagcttaaaaaaccttgttagctccgccataaaa
attaacgatactgttgaacctgttgatcgaagaagtcgcgatcaattattgggagactct
gtaatgatggctaacgtacgagccaaaattgcaaagcttgctcgcagccaagcacccatc
tatatcagtggtgaatcaggtaccggtaaagaattagttgccaagctaattcatgaaaaa
ggccctcgggctaatcaagcttttgtccccattaactgcggcgccatcccccatgaactg
atggaaagtgagttttttggccataaaaaaggcagctttaccggcgctatcgctgataaa
aaggggctattccaacttgctcatggtggcactttatttttagatgagatcgccgacctc
cctctacacatgcaagttaaattattacgggccatacaagaaaagtccatccgccccata
ggcagtgatactgaaaccgtgatcgacaccagaattttgtgtgccacccataaaaactta
agcgaactcgttgaaaaagggagctttcgacaggatttatattaccggattaatgtcatc
gaactccctttgccagctttgcgcgaacgcaaggaagacatccagcaactcgccactcat
attttacaaaaattaaataccgaacatggaaatactactataagccttagtgaaaatgcg
ctaaaagccctaacaaagtaccccttccctggcaatgtacgcgaactagaaaatatactc
gaacgcgcatttaccctatgtgaaaatgggcttattcaccaggcagatttacagctgccc
gaaaaccctcataacatacctaactcaatcaataccccagcgtcatcgcccaatgcaagt
gacgaatcatcagacgcaccattggaagattaccttggcacattggaaaaagaagccatc
gtcaatgcattagaaaaaacacgctggaacaaaacagccgcagcaaaagacctaggtatt
acctttcgtgccttacgataccgactaaaaaaactaggcttagacacttaa
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