KEGG   Corynebacterium yudongzhengii: C3B44_01550
Entry
C3B44_01550       CDS       T07188                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
cyz  Corynebacterium yudongzhengii
Pathway
cyz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cyz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C3B44_01550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cyz03400]
    C3B44_01550
DNA repair and recombination proteins [BR:cyz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C3B44_01550
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C3B44_01550
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 AAA_29 SMC_N DnaJ_CXXCXGXG AAA_16 AAA_15 AAA_23 nSTAND1 NACHT AAA_30 RsgA_GTPase AAA_22 AAA_33 Anti-TRAP DUF4350 DUF87 nSTAND3 NB-ARC cobW MobB AAA Zeta_toxin T2SSE PRK Lar_restr_allev AAA_19 ATP-synt_ab ATP_bind_1 Zn_ribbon_LysW SRP54
Other DBs
NCBI-ProteinID: AWB82908
UniProt: A0A2U1TA02
LinkDB
Position
332620..335007
AA seq 795 aa
MQIRGANLHNLRNVDVTLPRNELVAITGISGSGKSSLAFGTIHGEAQRRYFESVAPFARR
LIGSATSPEVEAVEGLPPSVALQQNTSAGGARSTVGTVSTMLNTVRLLYSRTGEYPQDVG
HLDSDNFSPNATAGMCPECQGTGITYEPTEASMVPDDSLTINEGAIKAWPGAWAGKNFRD
ILDTLEVPMDTPWRDLAQELRDWILFTDERPVVTVSPERRADQVEKQYQGTWRSTANYLR
ETLANTESDTLRKRTISFMESHTCSTCHGRRLHADALRVTYLGMPIDELNALTLAELDGM
LSEHTPQSPAEELLYESLTPILRSSIDLGLGHLSLDRPARTLSTGELQRVRLASQLRAGL
FGVLYVLDEPSAGLHPVEREAITTLVRRFIEQGNSVILVEHDMELVAGTDWLIDVGPQAG
EGGGNILYSGITDDYATSDADTPTARALAHRKLQLNDSAPEASASLELHGINARTLKDVD
VTIGLGQMTAVVGVSGSGKTTLLKVIADVLRAQTKNLDEDELASRTGAVSEVRGDDNVDR
LVPITQKPIGRTPRSCVATYTGLFDRVRKLFAKTDEAKRRKWNVSRFSYNVKQGQCPTCG
GAGQIEVELVFLPGSYVTCPDCQGGRYNPETLEVTWNGYTVADVLGLTVAEAVDVFAEDA
SISRALRALNAVGLGYLRLGQGAPELSGGEAQRIKLATELQRARRGHTLYLLDEPTTGLH
PHDAQLLMRELRRLVDEGDTVIFVEHDMNAVAGADRVIELGPGAGVDGGRIVADDTPARL
AEQDTPTAQVLAARA
NT seq 2388 nt   +upstreamnt  +downstreamnt
attcagatccgcggggccaacctgcataacttgcgcaatgtcgatgtgacgttgccgcgt
aacgaactcgtcgccattaccggtatctccggctcaggaaagtcttcgctggctttcggg
accatccacggggaggcacagcgtcgctactttgagtcggtcgcccctttcgcccgccgg
ctcatcggctcggcgaccagccccgaggtcgaggcggtcgagggcctgccgccgagcgtg
gcgctgcagcagaacacctcggccggcggggcgcgttcgaccgtcggcactgtgtcgacc
atgttgaacaccgtgcgccttttgtattcgcgcaccggcgagtacccgcaggatgtcggg
catttggattccgacaacttcagcccgaacgccaccgcgggcatgtgcccggagtgccag
ggcaccggcattacctatgagccgaccgaggcctcgatggtcccggacgattcgctgacc
atcaacgaaggcgcgattaaggcctggccgggcgcgtgggcgggcaagaacttccgcgac
atcctcgataccctcgaagttcccatggacaccccgtggcgcgatctcgctcaagagctg
cgcgactggatcctgtttacggacgagcgccccgtcgtcacggtcagcccggagcggcgc
gccgaccaggtggagaagcagtaccagggcacctggcgttcgacggcgaactacctgcgc
gagacgctcgcgaacaccgagtcggacaccctgcgcaagcgcaccatcagcttcatggag
tcgcacacgtgctccacgtgccacggccgtcgtctgcacgcggacgcgctgcgcgtgacc
tacctgggcatgcctatcgacgagctcaacgccctcaccctcgccgagctagacggcatg
ctctccgagcacaccccgcagtcgccggccgaggagctgctctatgaatcgctcaccccg
attctgcgctccagcatcgacctcgggctcgggcacttgagcctggaccgtccggcgcgt
accctgtcgaccggcgagctgcagcgcgtgcgcctcgcgtcccagctgcgcgccgggctc
ttcggcgtgctctacgtcctcgacgagccctcggccggccttcacccggtcgagcgcgag
gcgatcaccacgctcgtgcgccgtttcatcgagcagggcaacagcgtcatcttggtcgag
cacgacatggagctggtcgcggggacggactggcttatcgacgtcggcccccaagccggc
gaaggcggcggcaacatcctctactcgggtatcaccgacgactacgccaccagcgacgcc
gacaccccgaccgcccgcgcgctggcccaccggaagctgcagctcaacgattccgcgccc
gaggcgtctgcatcccttgagctccacggcatcaacgcccgcaccctcaaggacgtcgac
gtcacgatcggtctgggccagatgaccgccgtggtcggtgtctccggctcgggcaagacc
accctgctcaaggtcatcgccgacgtcctgcgcgcccagaccaagaacctggacgaagac
gagctcgcctcccgcacgggcgcggtcagcgaggtgcgtggcgacgacaacgtcgaccgc
ctcgtacccatcacgcagaagccgatcggccggaccccgcgctcgtgcgtggccacctac
accggcctgttcgaccgcgtgcgcaagctcttcgccaagacggacgaggcgaagcgtcgg
aagtggaacgtcagccgtttctcctacaacgtcaagcaaggccagtgcccgacctgtggc
ggcgccggccagatcgaggtcgagctcgtcttcctgccgggctcgtacgtcacctgcccg
gattgccagggcgggcgttacaacccggagaccctcgaggtcacctggaacggctacacg
gtcgccgacgtcctcggcctcaccgtggcggaggccgtcgacgtcttcgccgaggatgcc
tccatcagccgggcgctgcgcgcactcaacgccgtcggcctggggtatctgcggctcggc
cagggtgccccggagctctccggcggcgaggcgcagcgcatcaagctcgccacggagctg
cagcgcgcgcgtcgcgggcacacgctctacctgctcgacgagccgaccaccggcctgcac
ccgcacgacgcccagctgctcatgcgcgagctgcgccggctggtcgacgaaggcgatacc
gtcatcttcgtcgagcacgacatgaacgctgtggcgggcgcggaccgagtcatcgagctc
ggccccggcgccggtgtggacggcgggcgcatcgtcgcggacgacaccccggcacgcctc
gccgagcaggacaccccgaccgctcaggtgctggccgctcgggcataa

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