Corynebacterium yudongzhengii: C3B44_01550
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Entry
C3B44_01550 CDS
T07188
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
cyz
Corynebacterium yudongzhengii
Pathway
cyz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cyz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3B44_01550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyz03400
]
C3B44_01550
DNA repair and recombination proteins [BR:
cyz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3B44_01550
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C3B44_01550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
SMC_N
DnaJ_CXXCXGXG
AAA_16
AAA_15
AAA_23
nSTAND1
NACHT
AAA_30
RsgA_GTPase
AAA_22
AAA_33
Anti-TRAP
DUF4350
DUF87
nSTAND3
NB-ARC
cobW
MobB
AAA
Zeta_toxin
T2SSE
PRK
Lar_restr_allev
AAA_19
ATP-synt_ab
ATP_bind_1
Zn_ribbon_LysW
SRP54
Motif
Other DBs
NCBI-ProteinID:
AWB82908
UniProt:
A0A2U1TA02
LinkDB
All DBs
Position
332620..335007
Genome browser
AA seq
795 aa
AA seq
DB search
MQIRGANLHNLRNVDVTLPRNELVAITGISGSGKSSLAFGTIHGEAQRRYFESVAPFARR
LIGSATSPEVEAVEGLPPSVALQQNTSAGGARSTVGTVSTMLNTVRLLYSRTGEYPQDVG
HLDSDNFSPNATAGMCPECQGTGITYEPTEASMVPDDSLTINEGAIKAWPGAWAGKNFRD
ILDTLEVPMDTPWRDLAQELRDWILFTDERPVVTVSPERRADQVEKQYQGTWRSTANYLR
ETLANTESDTLRKRTISFMESHTCSTCHGRRLHADALRVTYLGMPIDELNALTLAELDGM
LSEHTPQSPAEELLYESLTPILRSSIDLGLGHLSLDRPARTLSTGELQRVRLASQLRAGL
FGVLYVLDEPSAGLHPVEREAITTLVRRFIEQGNSVILVEHDMELVAGTDWLIDVGPQAG
EGGGNILYSGITDDYATSDADTPTARALAHRKLQLNDSAPEASASLELHGINARTLKDVD
VTIGLGQMTAVVGVSGSGKTTLLKVIADVLRAQTKNLDEDELASRTGAVSEVRGDDNVDR
LVPITQKPIGRTPRSCVATYTGLFDRVRKLFAKTDEAKRRKWNVSRFSYNVKQGQCPTCG
GAGQIEVELVFLPGSYVTCPDCQGGRYNPETLEVTWNGYTVADVLGLTVAEAVDVFAEDA
SISRALRALNAVGLGYLRLGQGAPELSGGEAQRIKLATELQRARRGHTLYLLDEPTTGLH
PHDAQLLMRELRRLVDEGDTVIFVEHDMNAVAGADRVIELGPGAGVDGGRIVADDTPARL
AEQDTPTAQVLAARA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
attcagatccgcggggccaacctgcataacttgcgcaatgtcgatgtgacgttgccgcgt
aacgaactcgtcgccattaccggtatctccggctcaggaaagtcttcgctggctttcggg
accatccacggggaggcacagcgtcgctactttgagtcggtcgcccctttcgcccgccgg
ctcatcggctcggcgaccagccccgaggtcgaggcggtcgagggcctgccgccgagcgtg
gcgctgcagcagaacacctcggccggcggggcgcgttcgaccgtcggcactgtgtcgacc
atgttgaacaccgtgcgccttttgtattcgcgcaccggcgagtacccgcaggatgtcggg
catttggattccgacaacttcagcccgaacgccaccgcgggcatgtgcccggagtgccag
ggcaccggcattacctatgagccgaccgaggcctcgatggtcccggacgattcgctgacc
atcaacgaaggcgcgattaaggcctggccgggcgcgtgggcgggcaagaacttccgcgac
atcctcgataccctcgaagttcccatggacaccccgtggcgcgatctcgctcaagagctg
cgcgactggatcctgtttacggacgagcgccccgtcgtcacggtcagcccggagcggcgc
gccgaccaggtggagaagcagtaccagggcacctggcgttcgacggcgaactacctgcgc
gagacgctcgcgaacaccgagtcggacaccctgcgcaagcgcaccatcagcttcatggag
tcgcacacgtgctccacgtgccacggccgtcgtctgcacgcggacgcgctgcgcgtgacc
tacctgggcatgcctatcgacgagctcaacgccctcaccctcgccgagctagacggcatg
ctctccgagcacaccccgcagtcgccggccgaggagctgctctatgaatcgctcaccccg
attctgcgctccagcatcgacctcgggctcgggcacttgagcctggaccgtccggcgcgt
accctgtcgaccggcgagctgcagcgcgtgcgcctcgcgtcccagctgcgcgccgggctc
ttcggcgtgctctacgtcctcgacgagccctcggccggccttcacccggtcgagcgcgag
gcgatcaccacgctcgtgcgccgtttcatcgagcagggcaacagcgtcatcttggtcgag
cacgacatggagctggtcgcggggacggactggcttatcgacgtcggcccccaagccggc
gaaggcggcggcaacatcctctactcgggtatcaccgacgactacgccaccagcgacgcc
gacaccccgaccgcccgcgcgctggcccaccggaagctgcagctcaacgattccgcgccc
gaggcgtctgcatcccttgagctccacggcatcaacgcccgcaccctcaaggacgtcgac
gtcacgatcggtctgggccagatgaccgccgtggtcggtgtctccggctcgggcaagacc
accctgctcaaggtcatcgccgacgtcctgcgcgcccagaccaagaacctggacgaagac
gagctcgcctcccgcacgggcgcggtcagcgaggtgcgtggcgacgacaacgtcgaccgc
ctcgtacccatcacgcagaagccgatcggccggaccccgcgctcgtgcgtggccacctac
accggcctgttcgaccgcgtgcgcaagctcttcgccaagacggacgaggcgaagcgtcgg
aagtggaacgtcagccgtttctcctacaacgtcaagcaaggccagtgcccgacctgtggc
ggcgccggccagatcgaggtcgagctcgtcttcctgccgggctcgtacgtcacctgcccg
gattgccagggcgggcgttacaacccggagaccctcgaggtcacctggaacggctacacg
gtcgccgacgtcctcggcctcaccgtggcggaggccgtcgacgtcttcgccgaggatgcc
tccatcagccgggcgctgcgcgcactcaacgccgtcggcctggggtatctgcggctcggc
cagggtgccccggagctctccggcggcgaggcgcagcgcatcaagctcgccacggagctg
cagcgcgcgcgtcgcgggcacacgctctacctgctcgacgagccgaccaccggcctgcac
ccgcacgacgcccagctgctcatgcgcgagctgcgccggctggtcgacgaaggcgatacc
gtcatcttcgtcgagcacgacatgaacgctgtggcgggcgcggaccgagtcatcgagctc
ggccccggcgccggtgtggacggcgggcgcatcgtcgcggacgacaccccggcacgcctc
gccgagcaggacaccccgaccgctcaggtgctggccgctcgggcataa
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