Corynebacterium yudongzhengii: C3B44_02860
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Entry
C3B44_02860 CDS
T07188
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cyz
Corynebacterium yudongzhengii
Pathway
cyz03420
Nucleotide excision repair
cyz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cyz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C3B44_02860
03430 Mismatch repair
C3B44_02860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cyz03400
]
C3B44_02860
Enzymes [BR:
cyz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C3B44_02860
DNA repair and recombination proteins [BR:
cyz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C3B44_02860
MMR (mismatch excision repair)
Other MMR factors
C3B44_02860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AWB81426
UniProt:
A0A2U1T4Z1
LinkDB
All DBs
Position
606642..609860
Genome browser
AA seq
1072 aa
AA seq
DB search
MAEISPRLLAQILQGPDRRPNDQQVAATAAPPGPMLVVAGAGAGKTETMASRVLWLVANG
YVDPDEVLGLTFTRKAAQELSHRIRHQLRTLAGSPKIRDLDPSGELREKLTTQQPTVLTY
DSYAGQLIRQYGLLVPVEPDARLITEAELYALAHRVVTDYTGALTTTNEVPWVTETVLKL
ATEMDNALLDEDTVAERTQLFIDTAHELPKRQSNRKNSPEFPSDLRKWLNCQQLRLDLLP
VVRALKNTLRDEGLVTFNEQMSVAARLVSQRPLVADSQRRRYRVVMLDEYQDTSHAQRIL
LSHLYGTPEGVEREVDESLTVTAVGDPMQAIYGWRGATVENLEEFVNDFPRRADTARRQE
LTTSWRNPGDVLEMANDVSEGVFFPNGETAGRQRPVAKLEPREDAGPGEVSLAHYESEKE
EISAIADVMEHHFHATHDAGKPFTGAVLVRKNKQSQPIAQELAARGIPYEIVGLGGLLTM
PEVADIVAIATMLIRPGNSQAALRILSGPLVGLGMKDLTALVERARNLSGRKERTVLPDD
PTERLLTQLDEVTQDPPEQMAGLGDAVADIGEPERYSPAGLRRLQELSAKLRHLRTTSLA
KSLPDLFADIETVFDIRTEILSRPDAVERGGAVHLDKLLSTVAAYHGDSLAGLLDYFELA
KEHENGLEPGEVTVREDRVQILTAHKAKGLQWDVVAVAHADKATYTSLTETYLTKPYLVP
PADAGERYEEAGDRKDFTDGGKEWIETVKAEQAEEAARLFYVAMTRTERVLSITASGKEP
YAPFAQLKEKFPQVVTHWAVAAEKTTDKEEPKTGLFPALDVDEDTGAGAAFVRSALEELP
AASRGETFDFWEREVDALIEEHEALSAPVVEVEIPGDLTATDMVNLSADREQFARRSRRP
VPFKPNAYAKRGTAFHQWLEDRFGAQSLLDEDQLPGIGEPDLDDEQVAELKDAFLRSPWA
QRTPTYVEYPFEVAIGTTMVRGRMDAIFRQPDGSWLIVDWKTGRPPVGEQKRSAEMQLAV
YREAWRRIVGEDVPVDAEFYYVLHDQRLKPDDLYDGERLKEMLSLSAEGEKR
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggctgagatctcaccgcgcctgcttgcccagatcctccaagggcccgaccggcgaccc
aacgaccagcaggtcgctgccaccgcggcgcctccgggcccgatgctcgtcgtcgccggc
gccggtgccggcaagaccgagacgatggcctcgcgtgtgctctggctcgtcgccaacggc
tacgtcgacccggatgaggtgctggggctgacgtttacgcgcaaagccgcccaggagctc
agccaccgcattcggcaccagctgcgcaccctggcgggcagcccgaaaatccgtgacctg
gaccccagcggtgagctgcgcgagaaactcaccacccagcagcccacggtgttgacctat
gactcctacgccggccagctcatccgccaatacggactgctcgtgccggttgagccagat
gcccgcctcatcaccgaggccgagctctacgcgctggctcaccgggtggtcaccgactac
acaggggcgctgaccaccacgaatgaagtcccatgggtcaccgagactgtgctcaagctg
gccaccgagatggataacgcgctgttggacgaggacaccgtcgccgagcgcacccagctg
ttcatcgacaccgcccacgaactgcccaagcgccagagtaaccgcaaaaacagccccgaa
tttccgagcgatctcaggaaatggctcaattgccaacagctgcgcctcgacctcttgccg
gtggtgagggcactcaaaaacacgcttcgcgacgaaggcctggtcaccttcaacgagcag
atgtccgtcgccgcccggctcgtctcccagagaccgctggtcgcggactcgcagcggcgc
cggtaccgggtggtcatgctcgatgagtaccaggacacctcgcacgcccagcgcatcttg
ctctcgcacctctacggcaccccggaaggtgttgagcgcgaggtcgacgaatccttgacc
gtcaccgccgtcggcgatcccatgcaggctatctacggctggcgaggagcgacggtggaa
aacctcgaggagttcgtcaacgacttcccgcggagggcggatacggcgcgtcgacaagag
ctcaccacctcgtggcgcaaccccggcgacgtgttggagatggccaacgacgtctccgaa
ggcgtgttcttccctaacggggagactgccgggcggcagcggcccgtcgccaagctggag
ccgcgcgaggacgccggccccggcgaggtaagcctcgcgcattacgagagcgagaaggaa
gagatctccgcgatcgccgatgtgatggaacaccacttccacgccacccatgatgcgggc
aagccttttaccggtgcggtgctggtgcgcaagaacaaacagagccagcccatcgcccag
gagctggccgcccggggtattccctatgagatcgtggggctcggcgggctgctcacgatg
ccggaggtcgcggatatcgtcgcgattgccacgatgctcatccgtcccggcaactcgcag
gcggcgctgcggatcctctccggccccttggtcggtctggggatgaaagacctcaccgcg
ctcgtcgagcgtgcccgcaacctttccgggcgtaaggagcgcaccgttttgccggatgat
cccaccgaacgcctgctcacccagctcgatgaggtcacccaggacccgccggagcagatg
gccggtctcggcgacgcggtggcggatatcggcgagcccgagcgttactcgccggccggg
ttgcgccgcctgcaggaactctccgcgaagctgcggcacttgcggaccaccagcctggcg
aagtccctgccggatctcttcgccgatatcgagaccgtcttcgatatccgcaccgagatc
ctcagccgcccggatgccgtggagcgtgggggagcggtgcacctggacaagctgctatcc
accgtcgccgcctaccacggcgatagcctcgccggtctgctcgattattttgagcttgcc
aaggagcacgaaaacggcctcgagcccggtgaggtcaccgtgcgcgaagaccgcgtgcag
atccttaccgcgcacaaggccaagggcctgcaatgggatgtcgtcgccgtggcccacgct
gataaagccacctatacatccctgacggaaacgtatctcaccaaaccgtatctggtccct
cccgccgacgccggcgagcgctacgaggaagccggcgaccgcaaggacttcaccgacggc
ggcaaagagtggatagaaacagtgaaggccgagcaggctgaggaagccgcgcgcctgttc
tacgtcgccatgacgcgcaccgaacgggtgctctccatcaccgcgagtgggaaagagccc
tatgcgcccttcgcgcagctgaaggagaagttcccgcaggtggtgacgcactgggctgtc
gccgccgagaagaccacagacaaggaggagcccaagaccggcctgtttcccgccctggac
gtcgatgaggacaccggcgccggcgccgcctttgtgcgctccgcgctggaggagctgccc
gcagccagccgcggcgagaccttcgacttctgggaacgcgaagtcgatgccctcatcgag
gaacacgaggctttgtccgcgcccgtcgtggaggttgagatccctggcgatctcaccgcc
accgacatggtgaacctcagcgccgatcgcgagcagttcgcccgccgcagccgccgcccc
gtgcccttcaaacccaacgcgtacgccaagcgcggcaccgcgtttcaccagtggctcgag
gaccgcttcggcgcgcagtcgcttctcgacgaagaccaactccccggcatcggcgagccc
gatctcgacgacgagcaggtcgccgaactcaaagacgccttcctgcgctcgccgtgggcc
cagcgcacgcccacctacgtcgagtaccccttcgaggtggccatcggcaccaccatggtc
cgcggccgcatggacgccatcttccgccagcccgacggctcgtggttgatcgtcgactgg
aagaccggccggcccccggtgggggagcagaagcgctccgccgagatgcagctggccgtc
taccgcgaggcctggcgacgcatcgtcggtgaagacgtcccagtagacgccgagttctac
tacgtcctgcacgatcagcggctgaaaccggatgatctctacgacggggagcgcttgaaa
gagatgctgtccttatccgccgagggcgagaagcgctag
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