Cycloclasticus zancles: CYCME_0186
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Entry
CYCME_0186 CDS
T02780
Name
(GenBank) G:T/U mismatch-specific uracil/thymine DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
cza
Cycloclasticus zancles
Pathway
cza03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CYCME_0186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cza03400
]
CYCME_0186
Enzymes [BR:
cza01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CYCME_0186
DNA repair and recombination proteins [BR:
cza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CYCME_0186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Exotox-A_target
Motif
Other DBs
NCBI-ProteinID:
AGS38528
UniProt:
S5TU00
LinkDB
All DBs
Position
complement(184526..185053)
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AA seq
175 aa
AA seq
DB search
METLPDLLSAPLAALSVGLNPSIPSVKAGFYFANPRNRFWKALNQCGFFDEHIEASFKGC
QYLHTKYRIGFTDLVKRPTAGCGDLKAFDYRNGSSRLQQLIDDAQPDIIWFHGKLTCQKY
LQYSEGKQSVTSWGLQSWTINAKPVYVSPNPSPANAAFSLAVISDSYADFFKHLS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccttgccagacctacttagcgccccattagccgctttgtcagttgggttaaac
ccttctattccgtctgttaaggcagggttttactttgccaaccccagaaaccgattttgg
aaagcactcaatcagtgcggtttttttgatgaacatatcgaggccagttttaaaggctgc
caatacctacacactaaataccgaattggatttactgacctagtaaagcgcccaaccgct
ggctgcggcgacttaaaagcctttgactaccgtaacggtagctcccgactacagcaactc
atcgacgatgcacagcccgacataatttggttccacggtaaattaacctgtcaaaaatac
ctgcaatacagcgaaggcaaacaatctgtcaccagctggggcctgcaatcttggacgatt
aacgccaaacccgtttacgtatcacccaatcctagccctgcaaatgccgctttctcacta
gctgttattagcgacagctatgcagatttttttaaacacttatcataa
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