Cycloclasticus zancles: CYCME_0191
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Entry
CYCME_0191 CDS
T02780
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cza
Cycloclasticus zancles
Pathway
cza03420
Nucleotide excision repair
cza03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CYCME_0191 (uvrD)
03430 Mismatch repair
CYCME_0191 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cza03400
]
CYCME_0191 (uvrD)
Enzymes [BR:
cza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYCME_0191 (uvrD)
DNA repair and recombination proteins [BR:
cza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CYCME_0191 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
CYCME_0191 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AGS38533
UniProt:
S5TU07
LinkDB
All DBs
Position
189086..191251
Genome browser
AA seq
721 aa
AA seq
DB search
MDITHILDGLNDAQRDAVSGPEKAALILAGAGSGKTRVLVHRVAWLMQVEGVSPYSILAV
TFTNKAAGEMRERVQSMLKTPVGGMWIGTFHGIAHRLLRMHAQELGLPDAFQVLDSDDQF
RMIKRLLKSMNVDDSRWPPRQVQWFINAQKDEGKRAKHIAPSSDHFEQKMLEIYAEYEQV
CQRSGLVDFAELLLRAHELLRDNDAVRAHYQQRFKHVLVDEFQDTNTIQYAWLRLLTEES
ENLYVVGDDDQSIYGWRGAKIENIHRFQKDYAEHKVVRLEQNYRSTSTILKAANAIIVNN
DGRMGKELWTDGEEGELISLYSGYNDQDEARFVVDRIKDWVTNGHSREEAAILYRSNAQS
RLFEEYLMAAGIPYRVYGGYRFFERLEIKNALAYMQLATHHDNDAAFERIVNTPTRGLGT
RTLDIIREQARGKSISLWQAANELCEEAALTGRALNALTGFLALIRQLVVDMASMSLHEK
VEQVISRSGLIEHHKKEKGEKGEARVENLEELSNAARQFAYEADEAEELSELDSFLAHAA
LEAGEAQGDKFEDCVQLMTLHSAKGLEFPLVFMVGMEEGLFPSQRSVDDAAKLEEERRLA
YVGITRAKEKLYLTSAESRRLHGQESYPMPSRFIREIPAELMQEVRLGARVTRPVVSNQQ
ASFSDESAVGFKMGEHVVHAKFGEGVVLNIEGSGAQARVQVNFSSAGSKWLMLAYAKLDK
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatattacacatatattagatgggcttaacgatgctcagcgagatgcagtgagtggc
ccagaaaaggccgcacttattttagcaggggcaggcagtggtaaaacgcgtgtgctggtg
catcgagttgcctggctgatgcaggttgaaggtgtttcgccgtatagtattttggcggta
acgtttactaataaagcggcaggtgaaatgcgtgagcgtgtgcaatcgatgctaaaaaca
ccggttggtggcatgtggattggcacctttcatgggatcgcccatcgtttattaagaatg
catgctcaagaactgggcttacccgatgcgtttcaggtgctagattcagatgatcaattt
cggatgattaagcgtttgcttaaatcaatgaatgtggatgattcacgctggccacctcgc
caagtccaatggtttatcaatgcacaaaaagacgaaggtaaacgagcgaaacatattgcg
ccgtcgagtgatcattttgagcaaaaaatgttagagatttatgcagaatatgaacaagtt
tgtcagcgctctgggctggtcgattttgctgaattattacttagagcacatgagttatta
cgtgataacgatgcggtaagagcacattatcagcagcgttttaaacatgtgttagtcgat
gagtttcaagataccaataccattcaatatgcttggttacggctactcacagaagaatct
gaaaacttatatgtagtgggtgatgacgatcaatctatttatggttggcgtggtgcaaag
attgagaatattcatcgttttcaaaaagattatgctgaacataaggtggtgcgtttagag
caaaattaccgttccaccagtaccatcctaaaagcagccaatgccattattgttaataac
gatgggcggatgggtaaagagttatggaccgatggtgaggaaggtgagttaatctctttg
tattcgggctataacgatcaggatgaagcgcgctttgttgttgatagaattaaagactgg
gtgacgaatgggcacagtcgtgaagaagccgctattttatatcgctccaatgctcagtcg
cgcttatttgaagagtatctaatggctgccggtattccttaccgtgtgtatggtggttat
cgtttcttcgaacggttagaaattaaaaatgcattagcctatatgcaactggcgactcat
cacgataatgatgcggcatttgagcgcattgttaatacgccaacacgcgggctaggtacg
cgtacgctagatattattcgtgagcaagctcgtgggaaaagcataagcctttggcaggca
gcaaatgagttatgtgaggaagcggcgttaactggtcgagcattaaatgcattgacgggc
tttttagccttgattcgtcaactggttgttgatatggcgtcgatgagcttacatgaaaaa
gttgaacaggtaattagccgttctggtttgattgaacatcataaaaaagaaaaaggcgag
aagggcgaagcacgagtagaaaacttagaagagcttagcaatgcagcgcgtcaatttgcc
tatgaggccgatgaagctgaagagttgagtgagttagactcatttttagcccatgctgct
ttagaggctggtgaagctcaaggtgataaatttgaagactgcgttcaattgatgaccctg
cattcggcaaaaggcttggagtttccactggtctttatggttggtatggaagaaggcttg
tttcctagtcagcgctcggttgatgatgcagcgaaactagaagaagagcgacggctagcc
tatgttggtattacacgagcaaaggagaagttgtatttgacctctgcagaatcgcgtcgt
ttacatgggcaagaaagctatccgatgccgtctcgtttcattagggaaattcctgcagag
ttaatgcaggaggttcgtttaggcgctcgtgtaacacgccccgtagtaagcaatcaacaa
gctagttttagtgatgaatcagccgttggttttaaaatgggcgagcatgtcgtgcatgca
aaattcggcgaaggtgtggtgttgaatattgaaggcagtggtgcgcaagcgcgagtgcag
gttaatttttcttcagcgggtagtaaatggctaatgcttgcctatgcgaaattagataaa
gtttag
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