Cycloclasticus zancles: CYCME_0324
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Entry
CYCME_0324 CDS
T02780
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cza
Cycloclasticus zancles
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cza03032
]
CYCME_0324
03400 DNA repair and recombination proteins [BR:
cza03400
]
CYCME_0324
Enzymes [BR:
cza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CYCME_0324
DNA replication proteins [BR:
cza03032
]
Prokaryotic type
DNA Topoisomerases
CYCME_0324
DNA repair and recombination proteins [BR:
cza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYCME_0324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AGS38666
UniProt:
S5T4D6
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All DBs
Position
322549..324840
Genome browser
AA seq
763 aa
AA seq
DB search
MSALVIVESPAKAKTIEKYLGKGFTVLASYGHVRDLVPKEGAVDPDHDFAMKYSLVERNQ
RHVQAITKAMKKADELYLATDPDREGEAISWHVSELLKEKKLLKDKPVHRVVFHEITKKS
IQKAIQEPRELSMDMVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIVE
RELEIEAFNSREYWSIEAATKAANQSFKAKLTHVDGEKLTQFSVENAADANKIKDDIVAV
AANKLLVKKLQKKQRKRNPAAPFTTSTLQQEASRKLGFTTKKTMQIAQQLYEGVTIGSES
IGLITYMRTDSVNLAAEAVDEIRQLIESRYGKENLPKQAPVYKTKSKNAQEAHEAIRPSS
AARIPDEIRGSLSNDQYKLYLLIWKRVVASQMVHALIDGVSADLTCGKGYVFRATGSTVN
KPGFMSVYLEGKDDSKEDDDNKEKMLPPLEEGALVDLQEVIANQHFTEPPPRYGEASLVK
ALEEHGIGRPSTYASIISTLQNRDYVELETKRFYPTDVGRIVNKFLTQHFTNYVDYDFTA
KLEDGLDAVSRGEMQWLPLMKTFWQPFKTLIDDKEVSVQRSDVTQEALEEKCPECGKQLS
IRLGRNGRFIGCTDYPECSYTRNLNDDAASAEPEVVEGRKCPKCESNLIIRTGRYGKFIG
CSAYPDCKHMEPLEKPKDTNVVCPDCKKGTILERKSRKGKIFYSCSNYPKCKYALWNEPI
NEPCPNCNWPILTLKTTKRRGTEKVCPQQECSYVTPCEEMAKT
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcttgtcattgttgaatcgccagcaaaagcaaaaaccattgaaaaatactta
ggcaaaggatttactgttctagcgtcatatggccacgtgagggacttggttccgaaggag
ggcgcggtagacccggaccatgattttgcgatgaagtattctttggtcgaaaggaatcag
cgtcatgtgcaggcgattacaaaggcgatgaaaaaagccgatgagctttatcttgcaacc
gacccggatagagagggtgaggccatttcatggcatgtttctgagttattgaaggaaaaa
aaactgctcaaagataagccggtacatcgagtggtttttcatgagattactaaaaaatca
attcaaaaagcgatacaggagccgcgtgaattatcaatggatatggttgatgcgcagcaa
gctagacgcgcactcgattatttggttggttttaatttgtcgccgttgttatggaaaaaa
atcagacgcggcttatctgctggacgggttcaaagcccagcgttaagattaattgttgaa
cgtgaattagaaatagaagctttcaatagtcgtgaatattggagtattgaagcggcaact
aaggcggctaaccaatcttttaaagccaagctaacacatgtggatggcgaaaagctgacc
cagtttagtgtcgaaaacgcggcggatgcgaataaaataaaagacgatattgtggctgtt
gccgccaataaattattggttaaaaagctacaaaaaaaacagcgtaaacgtaacccagcc
gccccctttacaacctccacacttcagcaagaagcatctagaaagttaggttttacaact
aaaaagaccatgcagattgctcagcagctttatgaaggggtaaccatcggttcagaatca
attggtctgataacgtatatgcgaacagattcggtgaacttagcggctgaagcggttgat
gaaattcgtcaattgattgaatcgcgttatggtaaagagaatctacctaaacaagcgccg
gtttacaaaaccaaatcaaaaaatgctcaagaagcccatgaggctattcgtccaagctca
gcagcaaggattcctgatgaaattagagggtcgttgtcgaatgaccaatataaactctat
ttattgatctggaagcgcgtggtggccagccaaatggttcatgcgttgattgatggggtg
agtgcagacctaacctgcggcaagggctatgtttttcgggccacaggttcaacggtaaat
aaacccggtttcatgtcagtgtatcttgaaggtaaagatgacagtaaagaggatgatgac
aataaggaaaaaatgttgccacctctggaagaaggtgcgctagttgatttgcaagaggtg
atagcgaaccaacattttactgaaccgccccctcgttatggtgaggcaagcctagttaaa
gcgcttgaagagcatggaattggccggccatcgacctatgcatcgattatttcaacatta
caaaatcgcgactatgtagagctagaaacgaaacgcttttatccgactgatgttgggcga
attgtaaataaatttttaacgcagcattttacgaattatgtggattatgacttcaccgct
aaattagaagatggcctggatgccgtttcaagaggtgaaatgcagtggttgccattaatg
aagacgttttggcagccatttaaaacactgattgatgataaggaagtcagtgttcaacgt
agcgatgttacgcaagaggcgttggaggaaaagtgtccagagtgcggtaaacagctatcg
attcgcttgggtagaaatggacggtttattggctgtacggattaccccgaatgcagttat
acgcgtaacttgaatgatgatgccgcttctgcagagcctgaagttgttgaagggagaaaa
tgcccaaagtgtgaatctaatttaattattcgcaccggtcgatatggcaaatttataggt
tgtagtgcttatccagattgtaagcatatggaacctttggagaaaccaaaagacacgaat
gttgtttgtcctgattgtaaaaagggaacaatacttgaacgtaaatctcgaaagggtaaa
atattctactcgtgctctaattatcctaagtgtaaatatgcattatggaatgagccgatt
aatgagccatgcccaaattgtaattggcctattttgacattaaaaacaactaaaagacgt
ggcactgaaaaagtctgtccacaacaagaatgttcatacgtaacgccatgcgaagaaatg
gctaaaacttaa
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