Cycloclasticus zancles: CYCME_0504
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Entry
CYCME_0504 CDS
T02780
Name
(GenBank) Primosomal protein N' (replication factor Y) - superfamily II helicase
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cza
Cycloclasticus zancles
Pathway
cza03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CYCME_0504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cza03400
]
CYCME_0504
Enzymes [BR:
cza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CYCME_0504
DNA repair and recombination proteins [BR:
cza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CYCME_0504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
AAA_22
nSTAND3
PIF1
nSTAND_NTPase5
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AGS38845
UniProt:
S5TUW3
LinkDB
All DBs
Position
complement(498541..500742)
Genome browser
AA seq
733 aa
AA seq
DB search
MSDFYLNIAVDTPLHRIFDYLPIKNSARSDYQIGQRVFVSFGRLKKIGVILNISSSTELS
RKQLKPISQLIDRQPLISLDDLKLYKWAANYYHHPIGEVLAQAFPKQLRAGLTPTIELTT
RYALSKHGLTLDENSLKRSPRQLGLWHQLKNADAPVDRDFFSTLDWNWRSPLKSMIEKGW
VTASQEHNTATHSPTTPLFDPNPAQQTAIDSIAKALEGFQVFLLDGVTGSGKTEVYLRLI
QHVISAGKQVLILLPEITLTPQLAQRFRQRLTAQMVISHSGLNDTQRAQAWLRLKEGLAN
ILLGTRSAVFTPMRTPGLIIMDEEHDISFKQQEGFRYSARDIAVMRARDYSIPIVLGTAT
PSLESLYNVQQGRFKQLVLPERTAGASHPDIRLLDCRNQTLDNHLSQSLLKAIGKTLERN
EQVILFVNRRGFAPVLMCHSCGWVAQCRRCDSRLVIHKNANLLRCHHCGVEHAIPNTCPS
CQQAELFPLGLGTERVEETLSSHFPDTPVSRIDRDSTRQKNAMQSVIDKVHEGGAQILVG
TQMLAKGHHFPNVTLVGIVDIDAGLFSCDFRASERMAQLITQVAGRAGREEKLGRVLIQT
HHPEHPLLNTLITHGYTRFAKEALDERQQAQLPPYHYQALLRVNAINEQAVLNFLNDAKE
LISTIQAPLIQILGPVPAPMLKRAGRFRYQLLIESAQRKPRHQFLQQLLPKLEKLKSSRK
VRWSIDVDPIDLF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttttacctcaatattgctgtcgacacccccctgcaccgtatttttgactat
ctcccgataaaaaattcggctcgctctgattaccaaatcggccagcgtgtttttgtttcc
tttggccgattaaaaaaaattggcgttattcttaacatttcttcgtcaaccgaacttagc
cgaaaacaactcaaacccatctcccaattaattgatagacagcctctaatatcgcttgat
gacttaaaactatataaatgggctgctaactactatcatcaccctatcggcgaggtgctt
gctcaggccttcccaaaacagcttcgagccggattaacacccactatagagctcaccacg
cgatacgcattatccaaacatggcctgacactcgatgaaaattccttaaaacgctcccca
aggcagctaggcttatggcatcaactaaaaaacgccgatgcacctgttgatcgtgatttc
ttttccacacttgactggaactggcgctcgccccttaaaagcatgatcgagaaaggctgg
gtcactgcctcacaagaacacaacacagccacacactctccgaccacacctttatttgac
ccaaacccggcccaacaaactgccatcgactcaattgctaaggcactcgaaggctttcaa
gtatttttattagatggcgtcaccggtagtggaaaaacagaagtttatcttcgacttatt
cagcacgtcattagtgctggaaaacaggtgttaattttattgcctgaaatcaccctaaca
cctcaattagctcagcgatttaggcaacgcctaacagcacagatggtcatttcacattcc
ggccttaacgacactcaacgagctcaagcctggcttagattaaaagaaggccttgccaat
atattgctgggcacccgctcggcagtattcacgccgatgcgtacgcccggcctgatcatt
atggacgaggagcatgacatatcattcaaacagcaagaaggctttcgctattccgctcga
gatattgctgttatgcgtgcaagagactacagcatccctatcgtattaggcactgcaaca
ccctcgctcgaaagtctatacaacgtacaacaaggtcgtttcaaacaattagtgttgccc
gagcgtaccgcaggtgcctcacaccctgatattcgtttattagactgccgaaaccaaacg
ttagacaatcatttaagccaatcgcttttaaaagcgattggcaaaacacttgagcggaac
gaacaagtcatactctttgtgaatcgccgaggctttgcacccgtgttaatgtgtcatagc
tgtggttgggttgcacagtgtcgtcgttgcgactctcgtctagtcattcataaaaatgcc
aatttacttcgatgccatcattgcggagttgaacatgccattccgaatacctgcccatcg
tgtcaacaagcagaattatttccattagggcttgggactgagcgcgttgaagaaacattg
agctcgcactttcctgacacccctgtgagtcgaattgaccgcgatagcacacgacaaaaa
aatgccatgcagtcagtcattgacaaagtacatgaaggcggcgctcaaattttagtcggc
acgcaaatgcttgctaaaggacaccacttcccaaatgtgaccttagtaggcattgttgat
attgatgcagggctgtttagttgtgatttcagagctagcgaacgtatggcccagcttatt
acccaagtcgctggccgtgcaggacgcgaagaaaaactcggccgggtactcattcaaacc
caccaccccgagcaccccttattaaacaccttaatcacgcacggctacacgcgttttgca
aaagaggcactggatgaaaggcagcaagcccaattgcccccctaccattatcaagctcta
ttacgagtgaacgccatcaatgaacaagcggttctaaacttcctaaacgatgctaaggag
ttgatctctacgattcaagcaccgctgattcaaattctaggccccgttccagcccccatg
ctaaaaagggcgggacggtttcgctatcaattattaattgaatcggcccagcgaaaaccc
cgccatcaatttttacagcagcttttaccgaaacttgaaaaactcaaatcctcgcgtaag
gtacgttggtccattgatgttgatcccattgacttgttttaa
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