Cycloclasticus zancles: CYCME_0643
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Entry
CYCME_0643 CDS
T02780
Name
(GenBank) DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
KO
K03089
RNA polymerase sigma-32 factor
Organism
cza
Cycloclasticus zancles
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cza03021
]
CYCME_0643
Transcription machinery [BR:
cza03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CYCME_0643
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
TrmB
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
AGS38984
UniProt:
S5T612
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Position
complement(637832..638701)
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AA seq
289 aa
AA seq
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MTHALALPNQLSAGSLDAYIASVSSAPALTVEQERDLANRLRNENDLEAARMLVLSHMRY
VIHIAKSYSGYGLALPDLIQEGSIGLMKAVKRFDPDMGVRLVSYAVHWIKSEIHEFVIKN
WRIVKIATTKAQRKLFFNLRKHKKNLAWLDENEADAIANDLGVDKSAVYEMEKRLSNFDM
AFDGHQDDNTESDELIHTPATFVTKEEHDPATLLETYNEEAHDASRLNTALSNLDDRSRS
ILAERWLSEKKSTLHELADKYQVSAERIRQLEKNAMNKVKQELIEYRAS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgctttagcattacctaatcaattatcagctggatctttagatgcttatata
gcctctgtttcctctgcgcctgcgttaacggtagagcaagaaagagatttagcaaatcgt
ttacgaaatgaaaatgatttagaagctgctcgcatgctcgttttatctcatatgcgttat
gttatccatattgccaaaagctatagtggctatggccttgcactgccagatctcattcaa
gaaggtagcattggcttaatgaaagccgttaaacgctttgaccctgacatgggggttcgt
cttgtctcgtatgccgtacactggattaaatctgaaattcatgaatttgtaatcaaaaac
tggcgtattgttaaaattgcgacgacaaaagctcagcgcaaactgttcttcaacttaaga
aagcacaaaaagaacctagcatggctagacgaaaatgaagccgacgctattgcaaatgac
ctaggtgtcgataaatctgccgtttacgaaatggaaaagcgtttgagcaattttgatatg
gcttttgacggtcatcaagatgacaacacagaatcagacgaattgattcatacgcctgcg
acatttgtgactaaagaagaacacgaccctgctactttactagaaacatacaacgaagag
gctcacgatgcttctcgcttaaatactgcccttagcaaccttgacgatagaagtcgatca
attttagcagagcgctggttaagcgaaaagaaatcaactttgcatgagttagcagataaa
tatcaagtctctgctgaacgtattcgtcaattagaaaaaaatgcgatgaataaggtaaag
caagaattaattgagtatagagcctcttaa
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