Cycloclasticus zancles: CYCME_0879
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Entry
CYCME_0879 CDS
T02780
Name
(GenBank) Transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
cza
Cycloclasticus zancles
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cza03021
]
CYCME_0879
03009 Ribosome biogenesis [BR:
cza03009
]
CYCME_0879
Transcription machinery [BR:
cza03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CYCME_0879
Ribosome biogenesis [BR:
cza03009
]
Prokaryotic type
rRNA transcription factors
CYCME_0879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
HHH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AGS39214
UniProt:
S5T6S0
LinkDB
All DBs
Position
865796..867298
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AA seq
500 aa
AA seq
DB search
MANKEILMVVDVVSNEKEIDRSVLFEAIEAALEMATKKLYRDDIAVRVAIDRVSGDYESF
RQWEVVEADPEFENGLENPDAQILLEDAQKKDPTLEVGSFIEEPIESADFGRIGAQAAKQ
VIVQKVREAERRKVYELYKDKVGELVTGVIKRIERGNVFVDLEGTADAIIPREEMIPREP
VRTGDRIRGYLKSVEEVTRGPQLTVSRSAPELLTALFKLEVPEVGDGLIEILGAARDPGS
RAKIAVRTRDQRLDPVGACVGMRGSRVQAVSNELAGERVDIILWDENEAQFVINAMSPAE
VVAIVVDEDKHSMDVSVKDDSLSQAIGRGGQNVRLASELTGWKLNVMSETQADEQNSSEA
DGYAQQLMLDLDVDEDVALILVQEGYTSIEEINFADLDDLTDIEEFDEDIAEELQQRAKD
AYLIKAIASEEVLEEHEPAKDLLNMEGMDRELAFKLASKEIVTMEDLANLATDELLEIAS
IDEERATTLIMKAREPWFAE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggctaataaagaaattttaatggttgtagacgttgtttctaacgaaaaagaaattgat
cgtagtgttctttttgaagcaattgaagctgctttagagatggcaacgaaaaaactatac
cgtgacgacattgcagtacgtgtagctattgatcgcgtgagtggggattatgaatctttc
cgtcaatgggaggttgttgaagctgaccctgagtttgaaaatggtttagaaaacccagat
gctcaaattctactggaagatgcacagaaaaaagacccaactttagaagtgggtagcttt
atagaagagccaattgagtcggctgactttggccgaattggtgcgcaggctgcaaagcaa
gtgattgttcaaaaagttagagaagctgaacgaagaaaagtatacgaactttataaagat
aaagtgggcgagctggtcacaggcgttattaagcgtattgagcgtggtaatgtgtttgta
gacctagaagggacagcggatgccattattccacgtgaagaaatgattccaagggagccc
gttagaacaggcgataggattcgtggttacttaaagtcagtagaagaagtaacacgtggt
ccgcagctgacggtttcaagaagcgcaccagaattactaacagcgctttttaaactagaa
gtgcctgaagtaggagacggtttaattgaaattttgggggctgcgcgtgacccaggttca
agagcaaaaatagccgttcgtacacgagaccaacgtctagaccctgtgggtgcctgtgtt
gggatgcgtggttcacgagttcaagcagtatcaaatgaactggcaggtgaacgtgtagat
attattctttgggatgaaaacgaagcgcagttcgtgattaatgcgatgtcgccagctgaa
gtggttgcgattgtcgtggacgaagataaacacagcatggatgtgtcagttaaagacgat
agtctctcgcaggcaattggtcgaggtggacaaaatgttcgtttggcaagtgagttaact
ggctggaagcttaatgtgatgagcgagacgcaagcagatgagcaaaactcatcagaagca
gatggttatgctcaacaattaatgcttgatcttgatgttgatgaagatgttgcactcatt
ttagtgcaagagggttacacctcaattgaagaaataaatttcgcagatttagatgatcta
actgatattgaagaatttgatgaagatattgctgaagagctacaacaacgtgctaaggat
gcttacttaattaaagcaattgcttctgaagaagtcttagaagaacatgagccagccaaa
gaccttcttaatatggaagggatggatcgtgagttagcctttaaattagcgagcaaagaa
attgtcacaatggaagatttagctaatttagcaaccgatgaactactcgaaatagcaagt
attgatgaagagcgtgcgacaacattaattatgaaagcacgtgaaccttggttcgctgag
taa
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