Cycloclasticus zancles: CYCME_0884
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Entry
CYCME_0884 CDS
T02780
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cza
Cycloclasticus zancles
Pathway
cza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYCME_0884 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cza03019
]
CYCME_0884 (pnp)
03016 Transfer RNA biogenesis [BR:
cza03016
]
CYCME_0884 (pnp)
Enzymes [BR:
cza01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CYCME_0884 (pnp)
Messenger RNA biogenesis [BR:
cza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CYCME_0884 (pnp)
Transfer RNA biogenesis [BR:
cza03016
]
Prokaryotic type
tRNA degradation factors
CYCME_0884 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
KH_2
S1_2
DUF6160
Motif
Other DBs
NCBI-ProteinID:
AGS39219
UniProt:
S5T6S5
LinkDB
All DBs
Position
871653..873719
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AA seq
688 aa
AA seq
DB search
MNSVKKEFQFGHQTVSFETGEIARQADGAVLVEIDGTIVLVTAVGKREGGENNSFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPKGYKNETQVIATVISLN
PEVDPDIPALLGASAALAISGLPFEGPIGAARVGYINGEYALNPSKNALAESKLDLVVAG
TEDAVLMVESEADCLPEDIMLGAVTFGHEQMQAAIQAINELAEQVGKPRMEWVAPEKDQT
LLEKVADLATAGIADAYTILVKLDRQVKLQELRTSVLAQLEDEDPEEVKEIFSSLEKKHV
RGLVLSTKKRIDGRDLSTVRPIHVRTGVLPRAHGSALFTRGETQALVVATLGTDRDAQMI
DAVEGEYRDHFMLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIQAVLPSQEDFSYVL
RVVAEVTESNGSSSMASTCGTSLALMDAGVPIKSPVAGIAMGLIKEGDEFAVLSDILGDE
DHLGDMDFKVSGTDSGVTALQMDIKIQGITHEIMSNALEQAKAGRLHILEKMNSDLSQAR
EEMSDFAPRILTLKIDPAKIRDVIGKGGVTIRAITEETGASIDITDEGIVKVASVDREAG
EKALKRIEDITAEVEVGKIYEGKVVRLMDFGAFVSILPGKDGLVHISQISEERVEKVSDK
LSEGDVVNVKVLEVDRQGRVRLSMKEID
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcagtaaaaaaagagtttcaattcggtcatcagactgtatcttttgaaacaggt
gagattgcacgtcaagcagacggagcagtactagtagaaatagacggtacgattgtttta
gtaacagcagtaggtaaacgtgaagggggagaaaataattcattctttccgcttaccgta
aactatcaagaaaaaacatatgctgcaggtaaaataccgggtggtttttttaagagagaa
gggcgaccaagtgagaaagaaactctaacttctcgtcttatcgaccgtcctattcgtcca
ctgtttccaaaaggatacaaaaacgaaactcaggttattgcgactgttatttcactaaac
ccagaagttgatccagatattcctgccttattaggtgcatcagctgcattggctatttca
ggtctaccgtttgaaggtccaattggtgctgcacgagtaggttatataaatggtgaatat
gcattaaacccatcaaaaaatgctttggctgagtctaaattagatttagttgttgcaggt
actgaagatgctgttttaatggttgaatcagaagctgattgtttgcctgaagatattatg
ttgggcgccgtgacctttggccacgaacaaatgcaggcggctattcaggccattaatgag
ctagctgaacaggtgggtaagccacgtatggaatgggttgcacccgaaaaagatcaaacg
ttacttgaaaaagtggctgatcttgcaacagctggcattgcagatgcgtatacgattctt
gttaaacttgatcgtcaagttaaattacaagagctacgtacaagtgtattagcccaactt
gaagacgaagaccctgaagaagtaaaagaaatcttctcttctctagaaaagaaacatgtc
cgtgggttagtactatcgactaaaaaacgtattgatggacgtgatttgtcaactgttcgt
cctatccatgtgcgtacaggggttttacctcgtgcacacggttcggcactatttactcgc
ggtgaaacgcaggcattagttgttgcaacgttaggcacagaccgcgatgcacaaatgatt
gatgcagtagaaggtgagtaccgtgatcacttcatgttgcactataacttccctccatat
tgtgttggtgaaacaggctttgttggctcaccaaaaaggcgtgaaattggtcatggtcgt
ctagcaaaacgtggtattcaagcggttctaccaagccaagaagatttctcttatgtacta
cgtgttgtagccgaagtgacagaatcaaatggttcaagctcaatggcgagcacatgtggt
accagtttggcgctaatggatgcaggtgtgccgattaaatcacctgtagctggtatcgcg
atgggccttatcaaagaaggtgatgaatttgcggtcttgtctgacattttgggcgatgaa
gatcacttaggtgatatggactttaaagtctctggtacagactctggtgtgactgcactt
caaatggatatcaaaatccaagggattacgcatgaaatcatgtctaatgcgttggagcaa
gcaaaggcaggccgcttgcatatcttagaaaaaatgaattctgatctttcacaagcacgc
gaagagatgtctgattttgctccgcgcatccttacacttaagattgacccagcaaaaatt
cgcgatgttattggtaaaggtggtgtcactattcgggcaattaccgaagaaacaggcgca
tctattgatattactgatgaaggcatcgtaaaagttgcttcggttgatcgtgaagctggc
gaaaaagcgttaaaacgcatagaagatattactgcagaagttgaagtgggcaaaatttac
gaaggtaaagttgttcgtttaatggactttggtgcatttgtatcgatcttgccaggcaaa
gatggccttgtgcatatttcacaaatttctgaagagcgtgttgagaaggttagtgacaag
ctttctgaaggtgatgttgttaatgtgaaagttcttgaggttgatcgccaaggacgtgtt
agattaagcatgaaggaaatagattaa
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