Cycloclasticus zancles: CYCME_1105
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Entry
CYCME_1105 CDS
T02780
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
cza
Cycloclasticus zancles
Pathway
cza03030
DNA replication
cza03430
Mismatch repair
cza03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CYCME_1105 (holB)
03430 Mismatch repair
CYCME_1105 (holB)
03440 Homologous recombination
CYCME_1105 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cza03032
]
CYCME_1105 (holB)
03400 DNA repair and recombination proteins [BR:
cza03400
]
CYCME_1105 (holB)
Enzymes [BR:
cza01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYCME_1105 (holB)
DNA replication proteins [BR:
cza03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CYCME_1105 (holB)
DNA repair and recombination proteins [BR:
cza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CYCME_1105 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGS39436
UniProt:
S5T6M7
LinkDB
All DBs
Position
1109274..1110263
Genome browser
AA seq
329 aa
AA seq
DB search
MSNQLQAVYPWLQNYWGPLSRYLKQDRLPSALMLVGNEGLGVSSLAIAFAHRAVCSSSLD
EPFACGLCEACLLFKADNYPDFFHVIPEEGKTSIKIEPIRQLMSSLALSNQYTKPRIVVI
DPADAMSHSAANSLLKTLEEPSENTCLVLIVNQLSKVPATIRSRCQLITVKGIELTEAKG
WLVGLGCKEPEQYLSLANNAPLYAKELWQKEALKIRKLLLNNFIELLKGRLDPVLFAEKC
ISLKGLPVLKWLMSWLSDAIKCAHGALDNQLMNPDLRADLKVFIETLHLKGMHTLLEQLN
YLTSLESNQVNQQLMLEEFAIQSYSLTRK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcaattacaagctgtttacccttggttacaaaactattgggggccattatct
cgttacttaaagcaagaccgcttacccagtgctttgatgctagttggcaacgaagggtta
ggggtatcatcgttggctatcgcgtttgcccatcgagctgtttgttcttcatctcttgat
gagccgtttgcttgcggtttatgtgaagcgtgtttattgtttaaagctgataattaccca
gacttctttcatgtaatacctgaagagggcaaaacgagtattaaaattgaacccattcgg
cagttaatgtcatcattagcattaagcaatcaatatactaaaccaagaattgttgttatt
gacccagccgatgcgatgtctcattcagcggctaatagtttactgaaaaccttagaggaa
cctagcgaaaatacctgcctggttttgatagtgaatcaactgtcgaaagtacccgcaaca
ataagaagtcgttgtcagcttataaccgttaagggtattgagctgactgaggcaaagggt
tggttagttggtttgggctgtaaggagccagaacaatatttgagtttagctaacaacgcg
cctctttatgctaaagaattatggcaaaaagaggccttgaagatcagaaagctgttactg
aataactttatagagcttttgaaagggcgtttagatccagtcctatttgctgaaaaatgt
attagcctaaaaggcttgcctgttttaaaatggctgatgtcgtggttatctgatgcaatc
aagtgcgctcatggtgccttagataatcagctaatgaaccctgacctgagagctgacttg
aaagtttttatagaaacgctacacttaaaaggaatgcatacattgttagagcagttaaat
tatttaacatcgttagagtctaatcaagttaaccaacagttaatgctagaagagttcgcg
atacaaagttattcactaacacgtaaataa
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