Cycloclasticus zancles: CYCME_1820
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Entry
CYCME_1820 CDS
T02780
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cza
Cycloclasticus zancles
Pathway
cza03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CYCME_1820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cza03400
]
CYCME_1820
DNA repair and recombination proteins [BR:
cza03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CYCME_1820
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CYCME_1820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
SWI2_SNF2
HEM4
UB2H
Motif
Other DBs
NCBI-ProteinID:
AGS40136
UniProt:
S5T8P0
LinkDB
All DBs
Position
complement(1835633..1837633)
Genome browser
AA seq
666 aa
AA seq
DB search
MNKKFEIHSSFKPAGDQPKAIKALVEGVNHGEANQTLLGVTGSGKTFTMVHTIAELQRPA
LVLVHNKTLAAQLYGELKEFLPDNAVEYFVSYYDYYQPEAYMPASDTFIDKDASLNEHIQ
QMRLSATKALMERKDAVIVASVSCIYGLGDPELYFSMILHLSRGERVSQREIIRQLTDMQ
YKRNDVELLRATYRVRGDVIDIFPAESDQDALRVELFDDEIERLSLFDPLTGEIIQRIPR
YTIFPISHYVTPRETILEAIEKIKSELAIRLEQLRSLNKLVEAQRLEERTKFDLEMMREI
GYCSGIENYSRYLSGRKPNEAPPTLFDYLPDNALLFIDESHVTVPQVGAMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEAKAPQTIYISATPAKYEIERSGAVVEQVVRPTGLLDP
IIEVRPATTQVDDLLSEIKKRVAVEERVLVTTLTKRMSEDLTDYLMEHGVKVRYLHSDIE
TVERVEIIRDLRLGIFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSEVSMIQTIGR
AARNVKGKSILYADKITRSMQRAMDETSRRRETQQAFNEKHGISPTGIIKKVTDIMEGTA
RSQRSTMKKVADEAAKYQALSPAQMAKKIKELEAKMYQHSRDLEFEEAAKVRDEVNELQN
QMVLNS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaattcgaaattcactcatcttttaaaccagcaggcgatcaaccaaaggcg
attaaagcgctggttgagggagttaatcatggcgaagcgaatcaaaccttattaggggta
acaggctcaggtaaaacttttacgatggtgcataccatcgcagagctacaacggcctgct
ttggtgttggtgcataataaaacgctggccgcgcagttgtatggcgagcttaaagagttt
ttacccgataatgcggttgaatattttgtgtcgtattacgattactatcagccagaagcc
tatatgccggcatcagatacctttatagataaagatgcgtcattaaatgagcacattcag
caaatgcgcttgtctgcgactaaagcactgatggaacgcaaggatgcggtgattgttgcg
agtgtttcttgtatatatggcttaggtgatccggaactatattttagtatgattttgcat
ttatctcgtggtgagcgggtgagtcagcgcgagattattcgtcagttaacagacatgcaa
tacaagcggaatgatgttgaattacttcgggcaacgtatcgagtaagaggggatgtgatt
gatatatttcctgccgagtcagaccaagatgcgctgcgtgtggaattgtttgatgatgaa
attgagcgtttgtcgttgtttgatccattaaccggtgaaattatccaacgcataccgcgt
tacacaattttccctatttctcattatgtaaccccgcgcgaaaccattttagaagcgata
gagaaaataaaatctgaattggcaattcgcttagaacagttacgttcgttaaataaactg
gttgaggcgcaacggttagaagaacgtacaaagtttgatttggaaatgatgcgtgaaatt
ggctactgttcggggattgaaaattactcacgttatctatccggtagaaagcctaatgag
gcgccgcccacgttatttgattatttgccagataatgccttgctctttattgatgagtca
catgtgacggtgccgcaagtaggggcgatgtataaaggtgatcgttcaagaaaagaaacg
ttggttgaatatggcttccgtttgccatctgcgttagataatcggccgatgcgctttgaa
gagtttgaagcgaaagcgcctcaaacgatttatatttcagcgacacctgctaagtatgaa
atcgagcgctcgggggcggtggtggagcaagttgttaggccaacaggcttacttgacccg
attattgaagtaaggccggccacaacacaagtggatgacctgttgtcagaaattaaaaaa
cgagtggcagttgaagagcgtgtgttggttacaacgctaacaaaacgaatgtctgaagat
ttaaccgattacttaatggagcacggggtaaaggttcgctatctgcattctgatattgaa
acggttgaacgggtagaaattattcgtgatcttcgtttgggtatatttgatgtgttaatt
ggtattaacttattacgtgaaggcttggatattccagaagtgtccttagtagctatttta
gatgcagacaaagagggatttttgcgatctgaggtgtctatgattcaaacaatagggcgt
gcggcaaggaatgtaaaaggaaagagtattttatatgccgataaaataacacggtcaatg
caacgggcgatggatgagaccagtcgccgcagggaaactcagcaggcgtttaatgaaaag
cacggaattagcccaaccggaatcattaaaaaggtcaccgatatcatggaagggacggcc
cgatctcagcgaagtacaatgaaaaaagtagctgatgaagcggcaaaatatcaagcctta
tcaccagctcaaatggctaaaaaaataaaagaattagaagcgaaaatgtatcaacattca
cgagatttagagtttgaggaagccgctaaagtacgggatgaggtgaatgagttacaaaat
cagatggttttgaatagctag
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