Cycloclasticus zancles: CYCME_1934
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Entry
CYCME_1934 CDS
T02780
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cza
Cycloclasticus zancles
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cza03400
]
CYCME_1934
Enzymes [BR:
cza01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CYCME_1934
DNA repair and recombination proteins [BR:
cza03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CYCME_1934
Prokaryotic type
CYCME_1934
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGS40249
UniProt:
S5T9H7
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All DBs
Position
1956437..1957849
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AA seq
470 aa
AA seq
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MSAQHELVWFRNDLRTIDNPALYHACQSTQPVIAIYIATPQQWHQHDDAAVKLDFWHRNL
VQLEKELAELNIELHFFQHDNYQQIPDLIATICQQWAVNQVHVNAELAVNESQRDANVIE
RCQDIGVAYQEHHDQLLLPPASIRTKTGTPYKVFTAFSTQARQRLATPPSLYPVPNPCKK
ISDNATKRLSGQCQFADIHWPTVSKKIQTFWPAGQQEALTRLTEFCQQPIQHYKTDRDTP
SLAGTSRLSPYLASGILSAAQCWHATLHCEMSDGVHIWQNELLWREFYKHTLIDFPQVSK
HKPLKLQTEQIEWRHDEEQLVAWQDGKTGIPIVDAAMRQLLTRGWMHNRLRMIVAMFLTK
HLLIDWRLGERWFMQHLIDGDLSANNGGWQWCASTGSDSVPYFRIFNPVTQSQRFDPKGI
FIRHYLPELAHLSDKDIHLPSAKNRPENYPSPIVDLKRGRLRALSAFKGV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcacagcatgaattagtttggtttcgtaatgatttgcgcaccattgataaccct
gcgctttaccatgcttgccaatcgacacagccggttattgcaatatatattgccacacca
caacaatggcatcagcatgatgatgctgcggtaaaactggacttttggcaccgcaatctc
gttcaacttgaaaaagagttagctgagctaaatattgaattgcacttttttcagcatgat
aactaccagcaaattcctgatttaatcgccactatttgtcagcagtgggctgtaaatcaa
gtgcacgttaacgcggagctggccgttaacgaaagtcaaagagatgcaaacgttattgaa
cgatgccaagacattggcgtggcctatcaagagcatcacgaccaattgctgcttccacca
gcaagtatacggactaaaaccggcacgccgtataaagtatttacagcgttttcaacacaa
gctcggcagcggcttgcgaccccgcctagcctctaccctgtacctaatccttgcaaaaaa
ataagcgacaacgcaacgaagaggttgagtggacagtgtcagtttgcagacatacactgg
ccaacggtttcaaaaaaaatacaaaccttttggcctgccggtcaacaggaagccttaact
cgattgactgaattttgtcagcagcctattcaacactacaaaaccgatagggatacgcca
tcgttagctggcaccagccgactttcgccgtatctagccagtggaatactctccgctgca
caatgttggcacgcaaccttgcattgtgaaatgagtgatggcgtacatatttggcaaaac
gaattgctgtggcgtgaattttataaacacaccctgattgattttccgcaagtgtctaaa
cataagcccttgaagctgcaaacagaacagattgaatggcgacatgatgaagagcaatta
gtagcatggcaggatggtaaaaccggcattcctattgttgatgcggccatgcggcagcta
ttaacaaggggatggatgcataaccgtttgcggatgatagtggctatgtttttaacgaaa
cacttattgatagactggcgcttaggtgagcgttggtttatgcaacatttaattgatggt
gatctgtcggcaaacaatgggggctggcaatggtgtgcctcaacaggctctgattcagtg
ccttactttagaatttttaatccggtcactcaatcacaacggtttgatccaaagggtatc
tttattcgccactacctgcctgagctggcacacttatcagataaagacattcatttaccc
agcgccaagaatagaccggagaattaccctagcccgattgttgatttaaagcggggtcgc
ttaagagcgctgtctgcttttaaaggtgtatag
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