Cycloclasticus zancles: CYCME_2215
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Entry
CYCME_2215 CDS
T02780
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cza
Cycloclasticus zancles
Pathway
cza03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYCME_2215 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cza03019
]
CYCME_2215 (pcnB)
Enzymes [BR:
cza01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
CYCME_2215 (pcnB)
Messenger RNA biogenesis [BR:
cza03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CYCME_2215 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AGS40527
UniProt:
S5TI10
LinkDB
All DBs
Position
2255919..2257223
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AA seq
434 aa
AA seq
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MLTQHKPTTYTLHELGLSADKLDRHAVSITDRLVKAGFEAYLVGGCVRDLLLGLHPKDFD
VSTNAEPEEVQALFKNCRLIGRRFRLAHIHFGRHIIEVATFRGPHVKHDKNDSHAHRDGR
LLRDNVYGTLEEDAWRRDFTVNALYLDPKKKTVIDYVGGIKDHQNRVLRLMGDPVTRFKE
DPVRLLRAVRFQAKLNFQIENDTAAPMLEMAPLLKDIPSARLYDETLKLFLNTDANQIFD
ALRQYGLFEALFPQTDLCLKKATSDKPLGLLKQAMSNTETRLKNQQHVTPYFLLATLLWE
PVRRLIEQNRSSFSNDTQAIHAAANEVIAHQVSRLAIPKRMTTPMREVWALQPRFHKQIG
VRCLRFLEHPRFRAAYDFMLLRAQYGEVDEKIADWWTHIQTLDPTEQKLMTRPNQFKHKR
KSRKKPPKPNNTEL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgttaactcaacataaaccaaccacttacacattacatgaactcggtttatctgccgat
aaacttgaccgccacgctgtttcaattactgaccgcttggttaaagcaggctttgaagct
tatttagttggcggttgtgttcgcgacttattattaggactacaccctaaagacttcgat
gtttccaccaatgccgaacctgaagaagtccaagcgctattcaaaaactgccgattaatt
ggccgccgttttcggctcgcacatattcattttggtcgccatattattgaagtagcgact
tttcgcgggcctcacgttaaacacgataaaaatgacagccatgctcatcgagatggccgc
ctattgcgtgataatgtttatggaaccttagaagaagatgcttggcgccgtgattttacc
gttaacgcgctgtatttagaccctaagaaaaagaccgttattgattacgttggcggcatt
aaagaccatcaaaatagagtcttacggctaatgggcgaccctgtcacccgctttaaagaa
gacccggtaaggctccttcgcgctgttcggtttcaagcaaagttaaactttcaaatagaa
aacgacaccgccgcacctatgctcgaaatggcaccgttgctaaaagatattccttctgct
cgtttgtatgatgaaacactcaaacttttcctcaatacagacgcaaatcaaattttcgac
gcactccgtcaatatggtctatttgaagcgcttttcccgcagaccgacttatgtcttaaa
aaagctacttctgataaaccacttgggcttcttaaacaagccatgagcaacacagaaacc
cgcttaaagaatcagcaacacgtcaccccttattttttattggccaccttgctctgggaa
cctgtccgccggcttattgaacaaaacaggtcatcattcagtaatgatacgcaggccatt
catgcagcagccaatgaagtcattgcacaccaggttagccgactagctatcccaaagcgg
atgaccacacccatgcgtgaggtttgggctttgcaaccacgctttcataagcaaattggc
gtgcgatgtttgcgctttttagaacatccgcgctttcgtgcggcttatgattttatgcta
ttaagggcgcagtacggagaggtggatgaaaaaattgccgattggtggactcatatccaa
acactagaccctactgaacaaaagctaatgacacggcccaatcagttcaaacataaaaga
aaatcacgcaagaagccccctaaaccaaacaacactgagctttaa
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