Cycloclasticus zancles: CYCME_2367
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Entry
CYCME_2367 CDS
T02780
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cza
Cycloclasticus zancles
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cza03009
]
CYCME_2367
Enzymes [BR:
cza01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CYCME_2367
Ribosome biogenesis [BR:
cza03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CYCME_2367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AGS40677
UniProt:
S5TIF8
LinkDB
All DBs
Position
complement(2396778..2397770)
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AA seq
330 aa
AA seq
DB search
MPEHINYYNPIGLKTEQQIELIVPPEMAGLRLDQALAELCPEYSRSRLKSWVNSGNILID
NKTLRPRDKVNGGEAVIITPIADTSLNIKAEPIALNIVYEDESMLVVNKPAGLVVHPAAG
NWDGTLQNALLHHDPALEGLPRAGLVHRIDKETSGLLMVARTLTAHKLLVDQLQARAFER
EYLTVVRGYMTAGGTVDAPLARHPTDRKKYAVREGGKEAITHYRVAQRFAKHTLLKVNLE
TGRTHQIRVHMSHINHAIVGDQVYGGRFKPLANASELLSDTLRGFKRQALHAARLGVVHP
VTGEPISWECEMPADMAHLVEVLAKETPVK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcacatcaattattacaatcctattggcttgaaaactgaacaacaaatagaa
ttaatcgtcccacctgaaatggcagggcttcggctcgatcaggcattagctgagttatgc
ccagagtattctcgcagtcgcttgaaaagctgggtgaacagcggcaatatactgatcgat
aataaaacactgcgccctcgagacaaggttaatggtggggaggcggttattattacgccc
attgccgatacgtcattaaatatcaaagcggaaccgatcgcgcttaatattgtttatgag
gatgaatcgatgctggtggtaaataaaccggccggtttagtcgtgcatcctgcagcgggt
aactgggatggcacattacaaaatgctctattacatcatgaccctgcgctagagggtttg
ccacgagcgggcttggtgcatcgaattgataaagaaaccagcgggttgctaatggtagcg
cgcaccttaacggcacataagctattggtcgaccagttgcaggcacgtgcttttgagcgt
gaatacttaacggtggtgagggggtatatgacggccggtggcacagtggacgcaccctta
gcgcgacacccgactgatcgtaaaaagtatgcggttagagaggggggcaaagaggccatc
actcactatcgagttgcgcaacgctttgcaaaacataccttattaaaagtgaaccttgaa
acagggcgtactcaccaaattcgagttcatatgagtcatataaaccacgctatcgttggt
gaccaagtatatggtggacgttttaaacccttggctaatgcaagtgaactattgagtgat
actttacgtgggtttaagcgccaagcattacatgctgccaggttaggggtggttcatccg
gtcactggtgagccgatttcttgggaatgcgagatgcctgcggatatggcccatttggtt
gaagtattggcgaaagaaaccccggttaaatag
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