Cycloclasticus zancles: CYCME_2373
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Entry
CYCME_2373 CDS
T02780
Name
(GenBank) Sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cza
Cycloclasticus zancles
Pathway
cza02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CYCME_2373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cza02022
]
CYCME_2373
02035 Bacterial motility proteins [BR:
cza02035
]
CYCME_2373
Two-component system [BR:
cza02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
CYCME_2373
Bacterial motility proteins [BR:
cza02035
]
Pilus system
Twitching motility proteins
CYCME_2373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
HTH_30
VpsR
Mg_chelatase
AAA_22
AAA
Torsin
DUF6043
Motif
Other DBs
NCBI-ProteinID:
AGS40683
UniProt:
S5U0B6
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Position
2404180..2405550
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AA seq
456 aa
AA seq
DB search
MTQALALIVDDEPDILELLDITLSRMNISSKPAQDLAEAKRLLKTHHFDICLTDLQLPDG
NGLELVKHIQKNTPNLPIAVITAFGSMDTAVKALKLGAFDFVSKPVDLKSLKSLVSSAIK
INDTTEPVDRRSRDQLLGDSVMMANVRAKIAKLARSQAPIYISGESGTGKELVAKLIHEK
GPRSHQPFVPINCGAIPQELMESEFFGHKKGSFTGAIADKPGLFQTASGGTLFLDEVADL
PLHMQVKLLRAIQEKSIRPIGSDTEQPIDVRILSATHKNLPELVEQGNFRQDLYYRINVI
ELPLPPLRERAEDITQLAKHILQKLNAENNSPTKLTDTALKALAQYTFPGNVRELENILE
RAFTLCENGIIHQTDLQLPNNTKDAAAQTSGIKNPTQKTSLPTQEAPLEDYLDSLEKEAI
TNALEKTRWNKTAAAKELGISFRALRYRLKKLGLND
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagcgcttgcccttattgttgacgacgaacctgacattctcgagttacttgat
atcaccctgtctcgcatgaatatttcgagcaaacccgcgcaagacttagccgaagcaaaa
agattactaaaaacacaccactttgacatttgcttaaccgatcttcagctgcctgacgga
aatggccttgagcttgttaagcatattcaaaaaaacactcccaatctacccattgccgtt
attaccgcttttggtagtatggacactgcagtcaaagcactaaagcttggcgcttttgat
ttcgtttccaagcctgtcgacctgaaaagcttaaaaagcctcgttagctccgctattaaa
attaacgacaccacagaacccgttgataggcgtagtcgtgaccaactattaggcgactcc
gttatgatggcaaacgtacgcgcaaaaattgccaaactggctcgcagccaagcaccgatc
tacatcagcggcgagtctggaaccggtaaagagttggtcgccaagctaattcatgaaaaa
ggcccacgatcgcatcaaccttttgtgccaataaactgtggcgctattccgcaggaactc
atggagagtgagttttttggtcacaaaaaaggcagtttcaccggtgccattgccgacaaa
cccggtctttttcaaacggccagtggcggcaccttatttttagatgaagttgccgattta
ccactgcatatgcaagtcaaattattacgtgcaattcaagaaaaaagcattcgccccatt
ggcagcgatacagaacaacccattgacgtaagaatattaagcgccacccataaaaacctt
cctgagttagttgagcaaggcaattttcggcaagacttatattatagaattaatgttatc
gaactaccgctacctcctctacgcgagcgtgcagaagatattacacagctggccaagcac
attttacaaaaactaaacgccgagaataatagcccaaccaagctcaccgacactgcgtta
aaagcactcgctcaatacactttccccggtaatgtgcgcgaattagaaaatatactggaa
cgcgccttcactctttgtgaaaacggtattattcatcaaacagacttacaactgcccaat
aatactaaagacgccgccgcgcagactagcggtattaaaaacccaacacaaaaaacaagc
ctcccaactcaagaagcaccgctagaagactatcttgacagcttagagaaagaagccatt
accaatgccttagaaaaaacacgctggaataaaacagccgccgccaaagaacttggcatc
agctttcgtgcgttgcgttatcgcttaaaaaaattaggcctgaacgattga
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