Cycloclasticus zancles: CYCME_2473
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Entry
CYCME_2473 CDS
T02780
Name
(GenBank) Type IV secretion pathway protein VirD4
Organism
cza
Cycloclasticus zancles
Pathway
cza03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cza00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CYCME_2473
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Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AGS40778
UniProt:
S5U0Q0
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Position
2511979..2513664
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AA seq
561 aa
AA seq
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MIRREDLSKILKPVSWAVFWGLSASACVYHRAELPILAELTAAFCAYRSWKNISESWPLW
LHGHYQYLLLKAAETPSEKFGKAGFASEKDIESAGLFDPNNGVPIGCFNGRPMFYQFTHA
LCVAPAGSGKSISIALPSKLHGYRVSDEKGNSEAVSVVVTDIKGEIAAMTARMSEAQHKH
KVFYLNPDQLFGFPNSCFNPLQMVIDDMAYPPMNQNALADAQELVHQLLPEPAEGDKNKF
FRSGSRNMILTAMLFLAAENPACCTLPELFRIVSSAKRLKELLEEAANSTALSGDIALLA
SGLLDAEEDYFADFLTGALQVLMPFSPSTPLAQSVSKSDFTFEALKQEKTSVYIMSRYDR
RAAYAPWIGLVTKAAIKSLIRTEGNVPVHFLLDEATNIPLPGLANDLTALRGYGLRCQFI
CQAKSEVSRIYGKEATQTFYSQTDLKQFFGVSSLEEAKEISDMLGNHTIKTHSFGTSATS
PDADLKDSIAETTRALMRPEEVLRMPNTDQIILVSGVAPIYAERLPYNLVKSWHAALDEN
PLEGGKLPPNTQMNIRYKEVH
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtagagaagatctgtccaaaatcctaaaacctgtcagttgggcagtgttttgg
ggcttatcagccagcgcttgtgtttatcaccgcgctgagctgccaatacttgccgaacta
acagccgcattttgcgcctatcgtagctggaagaacatttcagaatcatggcctttatgg
ctgcatggccattatcagtatctacttttaaaagcggcggaaacaccgtctgaaaaattt
ggtaaagctggctttgctagcgaaaaagacatcgaatctgctggtttgtttgatccgaat
aatggcgtacctattggctgcttcaatggtcgaccgatgttttaccaatttacccatgcc
ttatgcgtagcgcctgctggctcaggcaagtcgatttcaattgctttgccgtcaaagctc
cacggttatcgtgtaagcgatgagaaaggcaacagcgaggcggtctcggtagttgttact
gacattaaaggtgagattgccgcgatgactgcgcgaatgagtgaggcgcagcataaacac
aaagtgttttacctcaatccagatcagctatttggctttcctaatagctgctttaacccg
ctgcaaatggtgattgatgatatggcgtatccgccaatgaatcaaaacgccttagcagac
gcgcaagagttagtgcatcagcttttgcctgagcctgctgaaggcgataagaacaagttc
tttcgtagcggttctcgcaatatgattttaaccgccatgctgtttctggcggctgaaaat
ccagcgtgctgtaccttgcctgaattgtttcgcattgtcagtagcgccaagcgtttaaaa
gagctgcttgaagaagctgcaaattcaacggctttatccggtgatattgcgttgcttgcc
tctggcctgctggatgcagaagaagattactttgctgattttctaacaggtgcattgcag
gtgcttatgccgtttagcccttctacaccgctggcgcagtcagtgagtaaaagtgacttt
acctttgaggcgctaaaacaggaaaaaaccagcgtatacattatgtcacgctatgaccgc
cgcgcagcctatgcgccatggattggccttgtcactaaagcggccatcaagtcattgatc
cgcactgaaggcaatgtgcctgtgcatttcctgttggatgaagcaacgaacattccattg
cctggtcttgctaatgacttaaccgctttacgcggctacggcttgcgctgccagtttatc
tgtcaggcaaaaagtgaagtgtcacgcatctatggtaaggaagcgacccagaccttttat
tctcaaactgatctcaagcaattttttggtgtttcatcgcttgaagaagcaaaagaaata
tcagacatgctgggcaaccacactattaaaacccatagctttggtacgtcggcaaccagt
cctgatgcagatctaaaagactctattgctgaaacgacccgcgccttaatgcgaccagaa
gaagtgctgcgcatgcccaataccgatcaaatcattttggtcagtggcgtagcgccaata
tacgcagaacggctgccatacaacctagtgaagtcatggcatgccgcgcttgatgaaaat
ccgcttgaaggtggaaagcttccccctaatacgcaaatgaatattcgctacaaggaggtg
cactaa
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