Entry |
|
Symbol |
polA
|
Name |
(GenBank) DNA polymerase I
|
KO |
|
Organism |
cza Cycloclasticus zancles
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cza00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CYCME_2492 (polA)
03410 Base excision repair
CYCME_2492 (polA)
03420 Nucleotide excision repair
CYCME_2492 (polA)
03440 Homologous recombination
CYCME_2492 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:cza03032]
CYCME_2492 (polA)
03400 DNA repair and recombination proteins [BR:cza03400]
CYCME_2492 (polA)
Enzymes [BR:cza01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYCME_2492 (polA)
DNA replication proteins [BR:cza03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CYCME_2492 (polA)
DNA repair and recombination proteins [BR:cza03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CYCME_2492 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CYCME_2492 (polA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2528978..2531695)
|
AA seq |
905 aa
MAEKTLVLVDGSSYLFRAYHALPLLTNSKGEYTNAILGVTNMLKKLVETYPEAYFGVIFD
APGKTFRNDMYPEYKANRASMPDELREQIKPLHQLIKAMGLPLVMEPGVEADDVIGTLAK
QAEEEDLNVVISTGDKDIAQLVTNKTSLINTMNNQWLDEEGVKEKFGVPPNMIIDYLALM
GDTSDNIPGVPKVGPKTAAKWLNAYGSLDEIIARADEVKGKVGESLRDHLDAIPLSKELV
TIKCDVPLDKAPADLIRTQPDTETLKEMVSHYEFNSWLKQLGGTKASTVASEQVDEKPLP
AKTELTVETILDEATFNQWLAKLTEAELFAFDTETTHLNYTKALVVGVSFAIEAGHAAYV
PLAHSYPGAPQQLSRQWVLDQLKPLLESESARKVGQNLKYDANVLANHGISLAGIYHDTM
LQSYVLNSTASRHNMDALAEKYLGQETIHYEDVAGKGAKQICFDQVSIELAAPYAAEDAD
ITLRLHQHIFPQLKQIDSLATVYETIEMPLVPVLARMEQTGVLVDEQMLSQQSGELTASI
KALETQAHEAAGQPFNLGSPKQIQEILYDKLGLPVLKKTPKGQPSTAESVLQDLAVDFPL
PRLILEHRSLSKLRSTYTDKLPKQINPVTGRVHTSYHQAVAATGRLSSSDPNLQNIPVRS
EEGRRIRQAFIAEEGFTVMAADYSQIELRIMAHLSQDTGLLQAFKEGLDVHKATAAEVFG
VPVDQVETHQRRSAKAINFGLIYGMSAFGLAKQLDIDRGAAQGYINLYFERYPGVKQYMD
ETRELAREQGYIETLFGRRLYLPDILAKNGQRRQYAERTAINAPMQGTAADIIKLAMLSV
DNWLQVDKPAVRMVMQVHDELVFEVENSYLDQAASIIQQKMSGAASLDVPLVVDVGMGKN
WDEAH |
NT seq |
2718 nt +upstreamnt +downstreamnt
atggctgaaaaaacattggtattggtagatggctcttcttacttatttcgtgcctatcat
gcactgccattattaacaaactcaaaaggtgaatacaccaacgccattttaggcgtaaca
aacatgcttaaaaaactggttgagacgtacccagaggcatattttggagtcatatttgat
gccccaggaaagacgtttcgtaatgatatgtatcctgagtataaagccaacagggcgtca
atgcctgacgagttgcgagagcaaattaagccattacatcagttaataaaagcaatgggg
ctacctttagttatggagccaggtgttgaggcggatgatgtgattggtacattggctaag
caggccgaagaggaagatcttaatgttgttatttcaacaggcgataaagacattgcgcag
ctggtcaccaataaaacgtcattaattaacacaatgaataaccaatggctggacgaagaa
ggcgtgaaggaaaagtttggtgtgccgcctaacatgattattgattatttagccttgatg
ggcgatacctccgacaatattccgggtgtgcctaaagtgggaccaaaaacggctgcaaag
tggctcaatgcatacggttcactggatgaaattatcgcaagggctgatgaagtaaaaggc
aaagtgggtgagagtttgcgtgatcaccttgatgcgattccgttatcaaaagagctcgta
acgattaaatgtgatgtaccgttagataaggctccggcggatttaataagaacgcagccg
gatacagaaaccttaaaggagatggtaagccattatgagtttaattcatggttaaaacag
ttgggtggaacaaaggcgtcgaccgttgccagcgaacaggtggatgagaaaccgttaccg
gcaaaaactgaattaaccgtagaaacgattctagatgaagcaacatttaaccaatggttg
gcaaagctgacagaggcagagttgtttgcctttgataccgaaacaacacatttaaactat
acaaaagcgttggtcgtgggtgtttcatttgctattgaagcaggtcatgcggcctatgtt
ccgttggctcatagctatcccggtgcgccacaacaactgtctaggcaatgggtgttggat
caattaaaacccttattagagtcagaaagtgctcgtaaggtcggtcaaaatcttaaatat
gatgcgaacgtgcttgctaatcacggtattagcttggcgggaatttatcacgatactatg
cttcagtcttacgttttaaatagcactgcatcgcggcacaatatggatgctttggctgaa
aaatacttggggcaagaaactattcattacgaagatgtggcgggtaaaggcgcaaaacaa
atatgttttgatcaagtgtctattgagctggcagcaccttacgcagcggaagatgctgat
attacgttacgtttacatcagcatatttttcctcagttaaagcaaatagacagtttggca
acggtctatgaaacgatagaaatgccactggtgcctgtgttagccagaatggagcaaaca
ggggtgttggttgatgagcaaatgttaagtcagcaaagtggcgaattaaccgccagcatt
aaagccttggaaacgcaggcccatgaggctgcgggccaaccatttaatctggggtcgcca
aagcaaatccaagagattctgtacgataaattaggcttgccagtcctaaagaaaacaccc
aagggtcaaccttcgacggcagagagcgttttgcaagatttagccgttgactttcccttg
ccgcgcttgattcttgagcaccgtagtttgagtaagttacgctcaacctataccgataaa
ttaccaaaacaaattaacccagtaactgggcgtgtgcatacttcctatcaccaagcggtt
gcggcaacgggacgattatcttcatctgatccgaatttacagaatattccggtacgcagt
gaagaaggtcgaaggattcgccaagcatttattgcagaggaaggctttactgtcatggca
gctgattattcacaaattgagttgcggattatggcgcatttatcgcaggacacgggtctt
ttgcaagcctttaaagagggtttagatgtgcataaggcaacagcagcagaagtgtttggt
gtgcccgttgatcaagttgagactcatcagcgccgttcggctaaggcgattaatttcggc
ttaatttatggcatgtctgcgtttggtttagcgaaacagttagatattgatcgcggcgct
gctcaaggctatatcaatttgtattttgaaaggtatccaggcgtaaaacaatatatggac
gaaacacgtgagctggcgcgtgagcaagggtatattgaaacgttattcggtcgacgttta
tacctgcctgatattctggctaagaatggacaacgtaggcagtatgccgaaagaacagct
attaatgcgcccatgcaaggaacagcggcagatattattaagttagccatgttgtcggtg
gataattggttgcaagttgataaacctgctgtgcgaatggtgatgcaggtgcatgatgaa
ttagtgtttgaagtcgaaaacagttatttagatcaggccgcgagcattattcaacaaaaa
atgagtggggcagcatctttggatgtgccattagtcgtggatgttggtatgggtaagaac
tgggatgaagcgcattga |