Clavibacter zhangzhiyongii: H9X71_05415
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Entry
H9X71_05415 CDS
T07408
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
czh
Clavibacter zhangzhiyongii
Pathway
czh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
czh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9X71_05415 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
czh03021
]
H9X71_05415 (rho)
03019 Messenger RNA biogenesis [BR:
czh03019
]
H9X71_05415 (rho)
Transcription machinery [BR:
czh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
H9X71_05415 (rho)
Messenger RNA biogenesis [BR:
czh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H9X71_05415 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
NACHT
SAP
CoV_NSP2_C
Motif
Other DBs
NCBI-ProteinID:
QOD44763
UniProt:
A0A7L7Z4T8
LinkDB
All DBs
Position
1126907..1129408
Genome browser
AA seq
833 aa
AA seq
DB search
MTDVDTRATAADLSALRVSQLQAIASELGIPGGSKLRKGELVTAISEIQAARGLTVPADE
AAPASDASAEDGDATTAEAPVAETAPVADAAPVAEQAPAAAPVLEDAAPAEDAAPAEDAA
PAEAAPTEAPVAEAAPAAEQPARSGRGSRRATTPRIVPERIEEPAEATAVAEPAGTGLEA
RIAQATGGRAPSARTQAPRTSDTRGDETRTEAPAGRRGSRRATSAGVVDPATEAPRQAAQ
HVNSGQTADQLVPAESEAPAAEAPTDEQAPTQRSGRGRRRGGRDAQDGAAQDAPAETASA
DEAPAADAQASGDDRDADAQDGRDGREGREGGRNRSRNRRNRDRGRDQDDQQQGGREQAP
REQAPREQDADDEAQEEARTGRGRQNGRGQGDRTQDVRADQARADLGRDEERGGRSRYRD
RKRGRGQGGDDFEPEVTEDDVLLPVAGILDVLDNYAFVRTSGYLPGTNDVYVSLGQVKKH
SLRKGDAIVGAIRQPRENDSQSRQKYNAIVKIDSVNGLPPEEAANRVEFGKLTPLYPQDR
LSLETEPAKLTTRIIDLVAPIGKGQRGLIVSPPKAGKTLVLQAIANAIATNNPEVHLMVV
LVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSI
TRLGRAYNLTAPASGRILSGGVDSSALYPPKRFFGAARNIEHGGSLTILATALVETGSKM
DEVIFEEFKGTGNMELRLSRALADKRIFPAVDVNASGTRREEMLMGADEVKVSWKLRRAL
AGLEQQQALEIVLSRLKETTSNVEFLMKVQASMPNTANGQSHQSHGHGAHEKG
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtcgacacccgcgccaccgccgcggacctgagcgcgctccgcgtctcccag
ctccaggccatcgcctccgagctcgggatcccgggcggctccaagctccggaagggggag
ctcgtgaccgcgatctccgagatccaggccgcccgggggctcaccgtccccgccgacgag
gcggctcccgcctccgacgcgtccgccgaggacggcgacgcgaccaccgccgaggcgccc
gtcgccgagaccgcgcccgtggccgacgccgcgcccgtcgccgagcaggcgcccgccgcg
gcgcccgtcctcgaggacgccgctcccgccgaggacgccgctcccgccgaggacgccgct
cccgccgaggccgcgccgaccgaggcgcccgtcgccgaggccgcgcccgccgccgagcag
cccgcgcgctccggccgcggatcccgccgcgccaccaccccgcgcatcgtgcccgagcgc
atcgaggagcccgccgaggccacggccgtcgccgagcccgcgggcaccggcctcgaggcc
cgcatcgcgcaggccaccgggggccgtgccccctccgcccgcacgcaggcgccccgcacc
tcggacacccgcggcgacgagacccgcaccgaggcgcccgccggacgccgcggatcccgc
cgcgccaccagcgccggcgtcgtggaccccgcgaccgaggccccgcgccaggccgcccag
cacgtgaacagcggccagacggccgaccagctcgtccccgcggagtccgaggcccccgcc
gccgaggccccgacggacgagcaggccccgacgcagcgctccgggcgcggccgccgccgc
ggcggacgcgacgcccaggacggcgccgcgcaggacgcgcccgccgagaccgcatccgcc
gacgaggcgcccgccgccgacgcgcaggcgtccggcgacgaccgcgacgccgacgcccag
gacgggcgcgacggccgcgagggacgcgagggcggccgcaaccgcagccgcaaccgccgc
aaccgcgaccgaggccgcgaccaggacgaccagcagcagggcggccgcgagcaggcgccc
cgcgagcaggcgccccgcgagcaggacgccgacgacgaggcgcaggaggaggcccgcacg
ggccgcgggcgccagaacggccgcggccagggcgaccgcacgcaggacgtgcgcgccgac
caggcccgcgccgacctcggacgcgacgaggagcgcggcggccgcagccggtaccgcgac
cgcaagcgcggccgcggccagggcggcgacgacttcgagcccgaggtcaccgaggacgac
gtcctgctgcccgtcgcgggcatcctcgacgtgctcgacaactacgcgttcgtccgcacg
agcggctacctgcccggcacgaacgacgtctacgtctcgctcggccaggtcaagaagcac
tcgctgcgcaagggcgacgccatcgtcggcgccatccgccagccgcgcgagaacgacagc
cagagccgccagaagtacaacgcgatcgtgaagatcgactcggtcaacggcctgccgccc
gaggaggccgcgaaccgcgtcgagttcggcaagctcacgccgctgtacccgcaggaccgc
ctcagcctcgagaccgagcccgcgaagctcaccacgcggatcatcgacctcgtggcgccc
atcggcaagggccagcgcggcctcatcgtctcgccgcccaaggccggcaagacgctcgtg
ctccaggccatcgcgaacgccatcgccaccaacaaccccgaggtccacctcatggtcgtg
ctggtcgacgagcgtcccgaggaggtcaccgacatgcagcgcacggtgaagggcgaggtc
atcgcctccaccttcgaccgtcccgccgaggaccacaccacggtcgccgagctcgccatc
gagcgcgccaagcgcctcgtggagctcggccacgacgtcgtggtgctgctcgactccatc
acccgcctcggccgcgcgtacaacctcacggcccccgcgtccggccggatcctctcgggc
ggcgtcgactcgtcggcgctctacccgccgaagcgcttcttcggcgccgcgcgcaacatc
gagcacggcggatcgctcacgatcctcgccaccgcgctcgtggagaccggctccaagatg
gacgaggtgatcttcgaggagttcaagggcaccggcaacatggagctccgcctctcgcgc
gccctcgccgacaagcgcatcttccccgccgtcgacgtcaacgcctccggcacgcgccgc
gaggagatgctcatgggcgccgacgaggtcaaggtcagctggaagctgcgccgcgccctc
gccgggctcgagcagcagcaggccctcgagatcgtcctcagccgcctcaaggagacgacg
tccaacgtcgagttcctcatgaaggtccaggcctccatgcccaacaccgccaacggccag
tcccaccagagccacgggcacggcgcgcacgagaagggctga
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