Clavibacter zhangzhiyongii: H9X71_13055
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Entry
H9X71_13055 CDS
T07408
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
czh
Clavibacter zhangzhiyongii
Brite
KEGG Orthology (KO) [BR:
czh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
czh03032
]
H9X71_13055
03400 DNA repair and recombination proteins [BR:
czh03400
]
H9X71_13055
Enzymes [BR:
czh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9X71_13055
DNA replication proteins [BR:
czh03032
]
Prokaryotic type
DNA Topoisomerases
H9X71_13055
DNA repair and recombination proteins [BR:
czh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9X71_13055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF4982
Motif
Other DBs
NCBI-ProteinID:
QOD43498
UniProt:
A0A7L7Z1A2
LinkDB
All DBs
Position
complement(2762493..2763461)
Genome browser
AA seq
322 aa
AA seq
DB search
MVRLRRSDATGKGYTRKRAGKGWTYLDSDGNRVTDKALRARMEHLGIPPAWTDVWIAPYE
NGHVQATGMDSAGRRQYIYHPTWREQKDRIKFDRALQLAESLPSARRQVTMHLRQDGYTR
DRALAAGFRMLDTGSLRVGSERYTESNGSHGLSTLLCSHVTVHDDVVHLEFPAKSGQEWS
SDIRDHDLVQVVRGLQDRGPNARLLAYEDDGEWHPLGAADINDYVRERTGGEFTAKDFRT
LHGTVAAAISLAKHGPEQTKGKRQRALAQAYRDAAEVLSNTPTIAKNSYVDPRLVDEYAH
GRTIDPQRLGSGETELRNLLFR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtcagactccggcgcagcgacgccaccggcaagggctacacgcgcaagagggccggg
aagggctggacctacctggactccgacgggaaccgggtgaccgacaaggcgctgcgcgcc
cgcatggagcacctcggcatcccgcccgcctggaccgacgtgtggatcgcgccgtacgag
aacggccacgtgcaggccacggggatggacagcgccggccgccggcagtacatctaccac
ccgacctggcgtgagcagaaggaccgcatcaagttcgaccgcgcgctccagctcgccgag
tcgctgccgtccgcccggcgccaggtgacgatgcacctccggcaggacggctacacgcgc
gatcgcgccctcgcggccggcttccgcatgctcgacaccgggagcctccgggtcggcagc
gagcggtacaccgagtcgaacggcagccacgggctctcgacgctgctctgctcgcacgtc
acggtccacgacgacgtcgtccacctcgagttccccgccaagagcgggcaggagtggtcg
agcgacatccgcgaccacgacctcgtgcaggtcgtccgcgggctccaggaccgcggtccc
aacgcgcgcctgctggcgtacgaggacgacggcgagtggcacccgctgggcgccgccgac
atcaacgactacgtgcgcgagcgcaccggcggcgagttcaccgcgaaggacttccggacg
ctgcacggcacggtcgccgccgcgatcagcctcgccaagcacggtccggagcagaccaag
ggcaagcggcagcgcgcgctggcgcaggcctaccgcgacgccgcggaggtcctcagcaac
accccgaccatcgccaagaacagctacgtggatccgcgcctcgtcgacgagtacgcccac
gggcggacgatcgacccgcagcgcctgggctcgggcgagacggagctccgcaacctgctg
ttccggtga
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