Corynebacterium zhongnanshanii: IAU67_08260
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Entry
IAU67_08260 CDS
T07917
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
czo
Corynebacterium zhongnanshanii
Pathway
czo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
czo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IAU67_08260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
czo03021
]
IAU67_08260
03400 DNA repair and recombination proteins [BR:
czo03400
]
IAU67_08260
Enzymes [BR:
czo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IAU67_08260
Transcription machinery [BR:
czo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IAU67_08260
DNA repair and recombination proteins [BR:
czo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IAU67_08260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Dioxygenase_C
DDE_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QNP92002
LinkDB
All DBs
Position
complement(1833202..1837170)
Genome browser
AA seq
1322 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSRGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAANIITSVDEEGRHNDLTTLEAEMLLEKKEVEADRDAELAERAQTLEED
LAQLEANGAKADAKKKVQSAADREMRHIRERAEREIDRLDEIWNTFVKLAPKQMIVDENI
YTELQDRYEDYFTGGMGAEAIQTLIRGFDLEAEAESLREVIRDGKGQKKLRALKRLKVVA
AFLRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMLDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKLMALELFKPFVMKRLVEKSYAQNIKSAKRMVERQR
SEVWDVLEEAIAEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYFLTMPKGREEFGGQ
GAYTPATEDAPAQGVYSSLAEAIMAFDRGVLGLQAPIKVRISHLRPPADIEAELFPDGWQ
RGQTWLAETTLGRVLFNELLPWNYPYVEGVMAKKPQAAIINDLAAKYPMITVAQTVDKLK
DAGFYWATRSGVTITMHDVLVLPNKREILDSYEAKARVIERKMARGKINESERYQSLVDL
WKEATDFVGQSVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVTNSLGDYITRPIK
TSFREGLSVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIIREDDCGTKQGV
VMNVADAVLDAEGNPTGQFTRADFVETSVAGRYLAADATNAQGDVLLAAGEVINDSDIDA
FIAAGVETVKVRSVLTCATATGVCSTCYGKSMATGKKVDIGEAVGIVAAQSIGEPGTQLT
MRTFHQGGVGGDITGGLPRVQELFEARVPKAKSPIASVDGRVKIEDDDNFFTLTIVPDDG
SEEVVYEKLSKRQGLATLANGGVERPIRDGDSVKMGQQLLKGSADPHEVLRVMGRRGVQQ
HLINEVQKVYRDQGVAIHDKHIEIIVRQMLRRVTVIDSGSTEFLPGSLVEHADAVAASKE
AVKSGGRPVEVRAEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKLIGLKENV
IIGKLIPAGTGIARYRNITVEPTEEARAAAYSLPSSFGDGFYGDDAYGDFTGAAVPLDDL
QL
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgttaacttcttcgatgagcttcgcatcggactcgctactgctgacgatatt
cgtcgttggtcccgtggtgaggttaagaagcctgagaccattaactaccgtactctcaag
cctgagaaggacggtctgttctgcgagcgtattttcggacctacccgcgactgggagtgt
gcttgtggtaagtacaagcgtgtccgctacaagggcatcatctgtgagcgctgtggtgta
gaggtcaccaagtccaaggtgcgccgtgagcgcatgggccacattgagctggctgcacct
gtgactcacatttggtacttcaagggtgttccttcccgcctgggttacctgctggacttg
gctccgaaggacctggagaagatcatctacttcgctgccaacatcatcacctctgtggat
gaggagggtcgccacaacgacctgaccaccttggaggcagagatgcttctggagaagaag
gaagtggaggctgaccgcgatgccgagctggctgagcgtgctcagactctggaggaggat
ctggctcagctggaggccaatggtgccaaggctgacgcgaagaagaaggtgcagtccgcg
gctgaccgcgagatgcgccacatccgtgagcgtgcggagcgtgagatcgaccgtttggac
gagatctggaacacgttcgtgaagctggctccgaagcagatgattgtggatgagaacatc
tacaccgagctgcaggaccgctatgaggattacttcaccggcggcatgggtgcggaggct
atccagaccctgatccgcggcttcgacttggaggccgaggccgagtccctgcgtgaggtc
atccgcgatggcaagggccagaagaagctgcgtgctctgaagcgcctgaaggtggttgcc
gccttcctgcgttccggtaacgaccctgcgggcatggtgctggattgcatccctgtgatc
ccaccagagctgcgtccgatggttcagctggacggtggccgcttcgccacgtccgacctg
aacgatctgtaccgccgcgtgattaaccgcaacaatcgcctgaagcgcatgctggatctg
ggtgcgcctgagatcatcgtgaacaacgagaagcgcatgcttcaggagtccgtggacgcc
ctgttcgacaatggccgacgcggccgtccagtcaccggcccaggtaaccgtccgctgaag
tctctgtctgacctgttgaagggtaagcagggccgcttccgccagaacctgctgggtaag
cgcgtggactactccggtcgttccgtgattatcgtgggtcctcagctgaagctgcaccag
tgtggtctgccgaagctgatggccctggagctgttcaagccattcgtgatgaagcgtctg
gtggagaagagctacgcgcagaacatcaagtccgctaagcgcatggtggagcgtcagcgt
tccgaggtgtgggatgtgctggaagaggccatcgccgagcaccctgtgatgttgaaccgt
gcaccaacgctgcaccgtctgggtattcaggccttcgagcctgtcctggtggagggtaag
gctatccagctgcaccctctggcctgtgaggccttcaacgccgacttcgatggtgaccag
atggctgtgcacttgccactgagtgctgaggcgcaagccgaggctcgtatcctgatgctg
gcctccaacaacattttgtctcctgcgtccggtaagcctctggctatgccgcgtctggac
atggtgacgggcctgtacttcctgacgatgccgaagggccgcgaggagttcggtggtcag
ggtgcgtacacccctgccacggaggatgctcctgctcagggcgtgtactcctccctggct
gaggccatcatggcgttcgaccgtggtgtgctgggcctgcaggctcccatcaaggtgcgc
atcagccacctgcgtccgcctgcggacatcgaggctgagctgttccccgatggctggcag
cgtggccagacctggttggcggagaccaccttgggtcgcgtgctgttcaacgagctgctg
ccgtggaactacccgtatgttgagggtgtgatggcgaagaagcctcaggctgccatcatt
aacgacttggctgcgaagtacccgatgattaccgtggcacagaccgtggacaagttgaag
gatgctggtttctactgggctactcgttccggtgtgactatcaccatgcatgacgtgctg
gttcttccgaacaagcgtgagatcctggactcctacgaggccaaggctcgtgtgattgag
aggaagatggcgcgaggaaagatcaacgagtccgagcgctaccagtccctggtggacctg
tggaaggaagctacggacttcgtgggtcagtctgtggaggacctgtacccggatgacaac
ccaattccgatgatcgtgaagtccggtgctgccggtaacatgcgtcagatttggaccctg
gcaggcatgaagggtatggtcacgaactccctgggtgactacatcacccgtccgattaag
acctccttccgtgagggcctgtcggtgctggagtacttcaacaactcgcacggttcccgt
aagggtctggcggatacagctctgcgtaccgcggactcgggttacctgactcgccgtctg
gtggatgtggcgcaggacgtcatcatccgcgaggacgattgtggcaccaagcagggcgtg
gtcatgaacgtggccgatgctgtgctggatgctgagggcaaccccacgggtcagttcact
cgcgcggacttcgtggagacgtctgtggctggccgttacctggccgccgacgccacgaac
gctcagggcgacgtgctgcttgctgccggtgaggtgattaatgattctgatatcgacgcc
tttatcgccgcgggggttgagaccgtcaaggttcgttccgtgttgacctgtgctaccgcg
acgggcgtgtgctcgacgtgctacggcaagtccatggcgacgggcaagaaggtggacatc
ggtgaggctgtgggtattgtggccgcgcagtccattggtgagcccggtactcagctgacg
atgcgtacgttccaccagggtggtgttggtggcgacattacgggtggtctgcctcgtgtg
caggagctgtttgaggctcgtgtgccgaaggcgaagtccccgattgcctccgtggatggc
cgcgtgaagattgaggacgacgataacttcttcaccttgaccatcgtccctgatgatggt
tccgaagaggttgtgtacgagaagctgtcgaagcgccagggcttggctacgctggccaac
ggtggtgtggagcgtccgatccgcgatggcgatagcgtcaagatgggtcagcagttgctg
aagggctctgcggatccgcatgaggttcttcgtgtgatgggccgccgtggtgtgcagcag
cacctgattaacgaggtgcagaaggtgtaccgcgatcagggtgtggctatccacgataag
cacattgagatcattgtgcgccagatgctgcgccgcgtgacggtgattgattccggttct
acggagttcctgcctggttcgttggtggagcacgctgatgctgtggctgcgtccaaggaa
gctgtgaagtccggtggacgtccggtggaggtccgtgcggagatcatgggtatcacgaag
gcctccctggctacggagtcctggctgtctgctgcgtccttccaggagaccactcgtgtc
ctgacggatgctgcgatcaacaagcgctccgataagctgatcggtctgaaggagaacgtg
atcatcggtaagctgatcccggctggtacgggtatcgcgcgttaccgcaacatcacggtg
gagcctaccgaggaggcgcgcgctgcagcgtactcgctgccatcgtccttcggtgatggc
ttctatggtgatgacgcctacggtgacttcaccggagctgcagttccgctggatgacctg
caactctaa
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