Frigidibacter mobilis: AKL17_0645
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Entry
AKL17_0645 CDS
T04387
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
daa
Frigidibacter mobilis
Pathway
daa03030
DNA replication
daa03430
Mismatch repair
daa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
daa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AKL17_0645
03430 Mismatch repair
AKL17_0645
03440 Homologous recombination
AKL17_0645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
daa03032
]
AKL17_0645
03400 DNA repair and recombination proteins [BR:
daa03400
]
AKL17_0645
Enzymes [BR:
daa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AKL17_0645
DNA replication proteins [BR:
daa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AKL17_0645
DNA repair and recombination proteins [BR:
daa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AKL17_0645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
AMY67905
UniProt:
A0A159YZG0
LinkDB
All DBs
Position
624707..628213
Genome browser
AA seq
1168 aa
AA seq
DB search
MTKAPRFIHLRVHTEYSLLEGAVPVKKLIAAATGMAMPAVAVTDTNNLFAALEFSVLAKG
AGLQPIVGCQVDLAYDLPQPGERPRRPAPVVLLAQTEAGYRNLMKLNSRLYLDKTGELPQ
VTPEQLAAHAEGLICLSGGPDGPIGRLLQAGQHAKAEAFLARLAAIYPGRLYVELQRHPG
EGGQLPEAERLTERGQVEMAYAMGLPLVATNDVYFPKAEMYEAHDALICIAEGAYVDQQE
PRRRLTPQHYLKTPDEMAALFADLPEALESTVEIARRCAFAVKKHAPILPRFADDEVEEL
RRQAREGLAARLAVIPHSVPVAEYEARLEFELGIIEQMGFPGYFLIVADFIKWAKGQGIP
VGPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRY
VQEKYGREKVGQIITFGALLSKAAVRDVGRVLQMSYGQVDRLSKMIPVEGVKPVSIEKAL
ADEPRLREAAKAEEVVARLLDYAKAVEGLLRNASTHAAGVVIGDRPLDELVPLYQDPRSD
MPATQFNMKWVEAAGLVKFDFLGLKTLTVIRNAIDLILGGGGQLHIAADGRKLYDPAPGA
ENDIGHIPLDDVPSYELYAAARTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGP
MENIPTYCDVKNGAKALESIHPTIDHILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLR
RAMGKKIAEEMAKERPKFIEGAKATHNVDAKKAGEVFDLLEKFANYGFNKSHAAAYAVVS
YQTAWLKANHPVEFMAAVMNCDIHLTDKLAVYKREVDRMGITTEPPCVNRSLATFAVSEG
RILYALGALKNVGVEAMRMIVEAREGRPYASLFDLARRVDLKRVGKRSLEMLARAGAFDR
LDPNRRRVFDSLDALASYSAAVHEAASSAQVSLFGAGGDDLPEPRLAPGDDWLPTERLAQ
EHGAIGFYLSGHPLDDYMPALKRRDVKTLAELTRAAQGGPILAKIAGNVSSRQERKSAKG
NRFAFVQLSDPTGLYEVTVFSDTLEAARQYLEPGLAVVLTVEATLEGETLKLLARKAEPV
DTVAAEAGGSGLRIHISAEAAIASVAALFDRVQADAKTRNGTGPVSVCVTDPGSGAEVEI
ALPQPLPVNPRIKGALKAIGGVVAVEEI
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagctccccgattcatccatctgcgtgtccataccgaatattcgctgctggaa
ggcgcggtgccggtcaagaagctgatcgcggccgccaccggcatggcgatgccggcggtg
gcggtgaccgacaccaacaacctctttgccgcgctggaattttcggtgctggctaagggc
gcggggctgcagcccatcgtcggctgccaggtcgatctggcctatgatctgccgcaaccg
ggagagcgcccgcgccgccccgcccccgtggtgctgctggcgcagaccgaggccggctat
cgcaacctgatgaagctgaacagccggctttacctcgacaagaccggcgagctgccgcag
gtgacgccggagcagctggcagcccatgccgaggggctgatctgcctgtcgggcgggcct
gacggccccatcggccggctgctgcaggctggccagcacgccaaggccgaggccttcctg
gcgcggctggcggcgatctacccgggccggctctatgtcgagctgcagcgccatcccggc
gagggcgggcaactgcccgaagcggaacggctgaccgaacgcggccaggtcgagatggcc
tacgcgatgggcctgccgctggtcgccaccaacgatgtctatttccccaaggccgaaatg
tacgaggcgcatgatgcgctgatctgcatcgccgagggcgcctatgtcgaccagcaggaa
ccccgccgccgcctgaccccgcagcattacctgaaaacgcccgacgagatggcggcgctc
ttcgccgacctgcccgaggcactggaaagcacggtggaaatcgcccgccgctgcgccttt
gcggtgaagaagcacgcgccgatcctgccgcgcttcgccgatgacgaggtcgaggaactg
cgccgccaggcccgcgaggggctggccgcgcgcctcgccgtgatcccgcattcggtgccg
gtggccgagtatgaggcgcggctggaattcgagctggggatcatcgagcagatgggcttc
cccggctatttcctgatcgtggccgacttcatcaaatgggccaagggccagggcattccc
gtcggccccggccgcggctcgggcgcgggcagcctcgtcgcctatgcgctgaccatcacc
gacctcgaccccctacgctattccctgctgttcgagcggttcctgaaccccgagcgcgtc
tcgatgcccgacttcgacatcgacttctgcatggaccgccgcgaagaggtgatccgctac
gtgcaagagaaatacgggcgcgagaaggtgggccagatcatcaccttcggtgcgctcctg
tccaaggccgcggtgcgcgacgtgggccgcgtgctgcagatgtcctatggccaggtggac
cggctgtcgaagatgatcccggtcgagggcgtcaaacccgtcagcatcgagaaggcgctg
gccgacgagccgcgcctgcgcgaggcggccaaggccgaagaggtggtcgcgcgcctgctg
gattacgcaaaagccgtcgagggccttctgcgcaacgcctccacccatgccgccggcgtg
gtgatcggcgaccgcccgctggatgagctggtgccgctctaccaggatccgcgctccgac
atgcccgccacccagttcaacatgaaatgggtcgaggcggcggggctggtgaagttcgac
ttcctcggcctgaagaccctgaccgtgatccgcaacgccatcgacctgatcctgggcggc
ggcggccagctgcacatcgccgccgatggccgcaagctctacgacccggcccccggcgcc
gagaatgacatcggccacatcccgctcgatgacgtgcccagctacgagctttacgccgcc
gcccgcaccgtcgcggtgttccaggtggaaagctcgggcatgatggacgccctgcgccgg
atgaagccgacctgcatcgaggatatcgtggcgctggtcgcgctctaccgccccggcccg
atggagaatatcccgacctattgcgacgtgaagaacggcgccaaggcgctggaatccatc
caccccaccatcgaccacatccttgccgagacgcagggcatcatcgtctaccaggaacag
gtgatgcagatcgcccaggtcatggccggctactcgcttggcggcgccgacctgctgcgc
cgcgcgatgggcaagaagatcgccgaagagatggccaaggaacgtcccaagttcatcgag
ggcgccaaggccactcacaatgtcgatgcgaagaaggcgggtgaggtcttcgacctcctg
gagaaattcgccaattacggcttcaacaagtcccacgccgcggcctatgccgtggtcagc
taccagaccgcctggctgaaggcgaaccacccggtcgagttcatggccgcggtgatgaac
tgcgatatccacctgaccgacaagctggcggtctacaagcgcgaggtggaccggatgggc
atcaccaccgagccgccttgcgtcaaccgcagcctcgccaccttcgcagtgtccgaaggc
cgcatcctctacgccctcggcgccctcaagaacgtgggggtggaggcgatgcggatgatc
gtcgaggcgcgcgaaggccgcccctatgccagcctcttcgatctcgcccgccgggtggac
ctgaagcgtgtcggcaagcgctcgctcgaaatgctcgcccgcgccggcgccttcgaccgg
ctcgaccccaaccgccgccgggtcttcgacagcctcgatgcgctggccagctattccgcc
gccgtgcatgaggcggcctcctcggcccaggtctcgctgttcggggcagggggggacgac
ctgcccgaaccgcgcctcgcccccggcgacgactggctgcccaccgaacggctggcgcag
gagcatggcgccatcggcttctacctctccggccatccgctcgacgactacatgcccgcg
ctgaaacgccgcgacgtgaagaccctcgccgaactcacccgcgccgcccagggcggcccg
atcctcgccaagatcgccggcaacgtctcctcgcgccaggaacgcaaatccgccaagggc
aaccgcttcgccttcgtgcagctctcggacccgaccgggctttacgaagtcaccgtcttc
tccgacacgctggaggccgcccgccagtatctcgaacccggcctcgccgtggtgctgacg
gtcgaggcgacgctggagggcgagacgctgaagctcctggcccgcaaggccgaacccgtc
gataccgtcgcggcagaggccggcggctccggcctgcgcatccatatctcggccgaggcc
gccatcgcctcggtcgccgccctgttcgaccgggtgcaggccgatgcgaaaacccgcaac
ggcaccggcccggtcagcgtctgcgtgaccgatccgggcagcggtgccgaggtcgagatc
gccctgccgcagcccctgccggtcaatcccaggatcaagggcgcgctgaaggccatcggc
ggtgtggtcgcggtcgaggaaatctga
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