Frigidibacter mobilis: AKL17_1838
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Entry
AKL17_1838 CDS
T04387
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
daa
Frigidibacter mobilis
Pathway
daa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
daa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AKL17_1838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
daa03400
]
AKL17_1838
DNA repair and recombination proteins [BR:
daa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AKL17_1838
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AKL17_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
DnaJ_CXXCXGXG
nSTAND1
BCA_ABC_TP_C
AAA_21
nSTAND3
DUF4350
Motif
Other DBs
NCBI-ProteinID:
AMY69088
UniProt:
A0A159Z471
LinkDB
All DBs
Position
complement(1806978..1809851)
Genome browser
AA seq
957 aa
AA seq
DB search
MAEQKFISVRGAREHNLKGIDVDIPRDQLVVITGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLDMMGKPDVDHISGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLYARAGT
PYSPATGLPITAQQVQDMVDGVMALPEGTRAFLLAPIVRDRKGEYRKELLELRKQGFQRV
KIDGSFHDLEDAPTLDKKLRHDIDVVVDRIVVREGLETRLADSFRTALDLADGIAILELA
PPAEAPEDFAAERITFSEKFACPVSGFTIPEIEPRLFSFNAPFGACPVCDGLGVELFFDE
RLVVPDITLKLTDGALAPWAKSKSPYQTQTIDALARHYGFDKRKAWKDLPEAVQQVFLYG
SGDEEIAFRFDEGGRVYQVSRTFEGLIPNMERRYRETDSAWSREEMERYQNNRPCGACNG
YRLKPEALAVKIAGLHVGQVVQMSIREAHDWIATVPEALTAQKNEIARAILKEISERLGF
LVNVGLDYLTLSRAAGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIGLHQRDNDRLLT
TLKNLRDQGNSVLVVEHDEDAIRHADYVYDIGPGAGVHGGRVVSHGTPAEVQADPASLTG
QYLSGARQIPMRSVRRKGNGKKLVISGACGNNLKNVTAEFPLGMFVCVTGVSGGGKSTLT
IETLYKTAAMRLNGARETPAPCDSIKGFEHLDKVIDIDQRAIGRTPRSNPATYTGAFGPI
RDWFAGLPEAKARGYKPGRFSFNVKGGRCEACQGDGLIKIEMHFLPDVYVTCETCKGQRY
NRETLEIKFKNKSIADVLDMTVEEAQDFFAAVPSIRDKMDALVRVGLGYVKVGQQATTLS
GGEAQRVKLSKELARRATGRTLYILDEPTTGLHFEDVRKLLEVLHELVEQGNTVVVIEHN
LDVIKTADWIIDIGPEGGDGGGEIVAVGTPEQVAEVKRSHTGRYLKPMLAARKVAAE
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcaaaagttcatctctgtccgcggcgcgcgcgagcataatctcaagggcatc
gacgtggatatcccccgcgatcagctggtggtcatcaccggcctgtccggctcgggcaag
tccagcctcgccttcgacaccatctatgccgagggccagcgccgctacgtggaatccctc
tccgcctatgcgcgccagttccttgacatgatgggcaagcccgatgtcgaccatatctcg
ggcctctcccccgcgatcagcatcgagcagaagaccacctcgaagaacccccgctccacc
gtcggcaccgtcaccgaaatctacgactacctgcgcttgctctacgcccgcgccggcacc
ccctattcgccggcaaccgggctgccgatcaccgcgcagcaggtgcaggacatggtcgat
ggcgtgatggccctgcccgagggcacccgcgccttcctgctggcgcccatcgtgcgcgac
cgcaagggcgagtatcgcaaggaactgctggaactgcgcaagcagggcttccagcgcgtg
aagatcgacggcagcttccacgatctggaggatgcgccgacgctcgacaagaagctgcgc
cacgatatcgacgtggtcgtcgaccgcatcgtggtgcgcgaggggctggagacgcggctg
gccgacagcttccgcaccgcgctggacctggcagacggcatcgccatcctcgaactcgcg
ccccctgcggaggcgcccgaggatttcgcggccgagcgcatcaccttctccgagaaattc
gcctgcccggtctccggcttcaccatccccgagatcgaaccgcggctcttttccttcaac
gcccctttcggcgcctgcccggtctgtgacgggctgggggtggagctgttcttcgacgaa
cgcctcgtcgtgcccgacatcacgctcaagctgaccgatggcgcgctggcgccctgggcc
aagtcgaaatccccctaccagacccagaccatcgacgccctcgcccgccattacggcttt
gacaagcgcaaggcctggaaggatctgcccgaggcggtgcagcaggtcttcctctatggc
tcgggcgacgaggaaatcgccttccgctttgatgaaggcgggcgcgtctatcaggtctcg
cgtaccttcgaggggctgatccctaacatggaacgccgctaccgcgagaccgacagcgcc
tggagccgcgaggagatggagcgctaccagaacaaccgcccctgcggcgcctgcaacggc
taccgcctgaaacccgaggcgctggcggtgaagatcgccgggctgcatgtcggccaggtg
gtgcagatgtcgatccgcgaggcgcatgactggatcgccaccgtgcccgaggcgctgacg
gcccagaagaatgaaatcgcccgcgccatcctcaaggaaatcagcgaacgccttggtttc
cttgtcaatgtcgggctggactacctgaccctctcgcgcgccgccggcaccctctcgggc
ggtgaaagccagcgcatccgcctggccagccagatcggctcgggcctgaccggcgtgctc
tatgtgctcgacgagccctccatcggcctgcatcagcgcgacaatgaccggctgctgacc
acgctgaagaacctgcgcgaccagggcaattcggtgctggtggtcgagcatgacgaagac
gcgatccgccatgccgattacgtttatgacatcggccccggcgccggcgttcatggcggg
cgcgtcgtcagccacggcaccccggcagaggtgcaggccgatccggccagcctgaccggg
caatacctgtcaggcgcgcggcagatcccgatgcgcagcgtgcggcgcaaggggaatggc
aagaagctcgtgatctcaggggcttgcgggaacaacctcaagaacgtcaccgccgagttt
ccgctggggatgttcgtctgcgtcaccggcgtgtcggggggcggaaagtccaccctgacc
atcgagacgttgtacaagaccgccgcgatgcgcctcaacggtgcccgcgagaccccggca
ccctgcgacagcatcaagggcttcgagcatctcgacaaggtcatcgacatcgaccagcgc
gccatcggccgcaccccccggtcgaacccggccacctataccggcgccttcggcccgatc
cgcgactggttcgccggcctgcccgaggccaaggcccgcggctacaagcccgggcggttc
agcttcaacgtcaagggcgggcgctgcgaggcctgccagggcgacgggctcatcaagatc
gagatgcattttctgcccgatgtctatgtgacctgcgaaacctgcaagggccagcgctac
aaccgcgagacattggaaatcaagttcaagaacaagagcatagccgacgttcttgatatg
acggttgaagaggcgcaggacttcttcgccgccgtcccctctatccgcgacaagatggat
gcgctggtgcgggtcgggctcggttacgtcaaggtcggccagcaggcgaccacgctctcg
ggcggcgaggcgcagcgggtgaagctgtccaaggagctggcgcgccgcgcgaccggccgc
acgctctatatcctcgatgagccgacgacggggctgcatttcgaggatgtgcgcaagctg
ttggaagtgcttcatgaattggtggaacagggcaatacggtggtggtgatcgagcataac
ctcgatgtcatcaaaaccgccgactggatcatcgacatcggccccgagggtggcgacggc
ggcggcgagatcgttgcggtcggcacccccgaacaggtggccgaggtcaagcgcagccat
accgggcgctacctcaaaccgatgctcgccgcccgcaaggtcgccgcagagtga
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