Frigidibacter mobilis: AKL17_4200
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Entry
AKL17_4200 CDS
T04387
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
daa
Frigidibacter mobilis
Pathway
daa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
daa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKL17_4200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
daa03019
]
AKL17_4200
03016 Transfer RNA biogenesis [BR:
daa03016
]
AKL17_4200
Enzymes [BR:
daa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AKL17_4200
Messenger RNA biogenesis [BR:
daa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AKL17_4200
Transfer RNA biogenesis [BR:
daa03016
]
Prokaryotic type
tRNA degradation factors
AKL17_4200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AMY71415
UniProt:
A0A159Z7J6
LinkDB
All DBs
Position
4169642..4171774
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AA seq
710 aa
AA seq
DB search
MFNVIRKSIQWGNETLTLETGKIARQADGSVIATLGETSVMANVTFAKEPKPGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPSEKETLTARLIDRPIRPLFVPGFKHEVLVMCTVLSH
DLVNDPDIVAMIATSAALTISGVPFMGPIGAARVGFSNGAYVLNPEVQDMDKLRSNPEQR
LDLVVAGTKDAVMMVESEAYELSEDEMLGAVKFGHDAMQPVIDMIIDFAEDSAKEPFDFQ
APDYSALYSKVKAAAETQMRAAFAIKDKQERTTAIDAARTAAKAALSEEELASPNLGSAF
KKLESSILRGDIINGGARIDGRDNKTVRPIVAEVGILPRTHGSALFTRGETQGLVVTTLG
TGDDEQIIDALHGNSRSNFLLHYNFPPYSVGEVGRVAGPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEDDGRYA
VLTDILGDEDHLGDMDFKVAGTEAGITSLQMDIKVAGITPAIMEQALAQAKDGRMHILAE
MAKALTAGRQEFSAHAPRIETMQIPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGIIK
IASANADSIKKAYDMIWSIVAEPEEGKIYTGKVVKLVDFGAFVNFFGKRDGLVHVSQIAK
QRLKHPNEILTEGQEVKVKLLGFDDRGKVRLGMRMVDQTTGAEISDSEDA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgttatcaggaaatccatccagtggggcaacgagacgctcacgctggaaacc
ggcaagatcgcgcgtcaggcagacggctcggttatcgccacgctgggcgaaaccagcgtc
atggcgaacgtgaccttcgccaaggagccgaaaccgggccaggacttcttcccgctcacg
gttcactaccaggaaaaatactacgctgccggcaagatcccgggcggcttcttcaagcgc
gaggcgcgtccttccgaaaaggaaacccttaccgcgcgcctgatcgaccgtccgatccgc
ccgctgttcgttcccggcttcaagcatgaagtgctggtgatgtgcacggtgctgtcgcac
gatctggtcaacgatcccgacatcgtggcgatgatcgccacctcggccgcgctgaccatt
tccggcgtgccgttcatgggtccgatcggcgccgcgcgcgtcggcttcagcaacggtgcc
tatgtcctgaatcccgaggtgcaggacatggacaagctgcgcagcaaccccgagcagcgg
ctcgacctggttgtcgccggcaccaaggacgccgtgatgatggtcgaatccgaagcctac
gagctgtcggaagacgagatgctgggcgcggtcaagttcggccatgacgcgatgcagccg
gtgatcgacatgattatcgacttcgccgaagacagcgccaaggaacccttcgacttccag
gccccggactactcggcactgtactccaaggtgaaggctgcggccgaaacccagatgcgc
gccgcctttgcgatcaaggacaagcaagagcggaccaccgccatcgacgccgcccgcacc
gccgccaaggccgcgctgtcggaagaagagctggccagcccgaacctcggttcggccttc
aagaagctggaatcctcgatcctgcgcggggacatcatcaacggtggcgcccgcatcgac
ggacgtgacaacaagaccgtccgcccgatcgtggccgaagtcggcatcctgccgcgtacc
cacggctcggcgctgttcacccgcggtgaaacgcagggcctggtcgtcaccacgctcggc
accggcgacgatgagcagatcatcgacgccctgcacggcaacagccgctcgaacttcctg
ctgcactacaacttcccgccctactcggtcggcgaggttggccgcgtcgcaggcccgggt
cgccgcgaaatcggccacggcaagctggcttggcgtgcgctgcaggccgtcctgcccgcc
gcgaccgacttcccctataccatccgcgtcgtgtccgagatcaccgaatccaacggttcg
tcctcgatggcttccgtctgcggcggctcgctgtcgatgatggatgccggcgttccgctg
aaggctccggttgccggcgtggcgatgggcctgatcttggaagatgatggccgctatgcg
gtgctgaccgacatcctgggcgacgaggatcacctcggcgacatggacttcaaggtcgcg
ggcaccgaagccggcatcacctcgctgcagatggacatcaaggttgcgggcatcaccccc
gcaatcatggaacaggcgctggcccaggccaaggatggacggatgcacatcctggccgag
atggccaaggcactgaccgcggggcggcaggaattctctgcccacgccccgcgcatcgag
acgatgcagatcccgaccgacaagatccgggaagtcatcggctcgggcggcaaggtcatc
cgcgagatcgtggaagtgtcgggcgccaaggtcgacatcaacgacgacggcatcatcaag
atcgcctcggccaatgccgattcgatcaagaaggcctatgacatgatctggtcgatcgtg
gcagagccggaagaaggcaagatctacaccggcaaggtcgtgaagctggtcgatttcggc
gccttcgtgaacttcttcggcaagcgcgatggcctcgtccacgtctcgcagatcgccaag
cagcggctgaagcacccgaacgaaatcctgaccgaaggtcaggaagtgaaggtgaagctg
ctgggcttcgacgatcgcggcaaggtccgcctcgggatgcggatggtcgaccagaccacc
ggcgccgagatcagcgactccgaagacgcataa
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