Deinococcus actinosclerus: AUC44_00905
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Entry
AUC44_00905 CDS
T04259
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dab
Deinococcus actinosclerus
Brite
KEGG Orthology (KO) [BR:
dab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dab03032
]
AUC44_00905
03400 DNA repair and recombination proteins [BR:
dab03400
]
AUC44_00905
Enzymes [BR:
dab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AUC44_00905
DNA replication proteins [BR:
dab03032
]
Prokaryotic type
DNA Topoisomerases
AUC44_00905
DNA repair and recombination proteins [BR:
dab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AUC44_00905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALW87630
LinkDB
All DBs
Position
189939..190976
Genome browser
AA seq
345 aa
AA seq
DB search
MTSRTELLAGEYLRREGNDPKKFKYFWPDGTPYKEKAGIDRIAKLAVPPAYEDVYVSPDA
DAELQAFGRDAAGRLQYRYHPDFVQAGALKKWQRLTRFAGALGTLKTVTAGDLRAQGLPP
RKVTALMTRLLHVARFRVGSDIYAQQHKTYGLSTLRQRHVQVGGNTVTFHFKGKHGITQH
KATTDRTLATNITRLLDLPGPWLFQTVDEGGARRRVRSGELNAYLKEVIGPFTAKDFRTW
GGTLLAAEYLAEAGVADTEKQARQTLVDCVKYVAADLGNTPAVTRSSYICPVIFDRYLEG
KILDDYEPRATKGESDLDGLTRSEAALKRLLESEKTLRTRRKKAA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccgcaccgaactcctcgccggggagtacctgcgccgcgagggcaacgacccc
aagaagtttaaatacttctggcccgacggcacgccctacaaggagaaggcgggcatcgac
cgcatcgcgaaactcgccgtgccccccgcctacgaggacgtgtacgtcagccccgacgcc
gacgccgaactccaggctttcgggcgcgacgccgccggacgcctccagtaccgctaccac
ccggacttcgtgcaggcgggcgcgctgaagaaatggcagcgcctcacccgcttcgccggg
gcgctcggcaccctcaagaccgtcaccgccggtgacctgcgcgcccagggcctccccccc
cgcaaggtcacggccctcatgacccgcctgctgcacgtcgcccgcttccgcgtcggcagc
gacatctacgcccagcagcacaagacctacggcctcagcacccttcgccagcggcacgtg
caggtgggcgggaacaccgtcaccttccacttcaagggcaagcacggcatcacgcagcac
aaggccaccaccgaccgcaccctcgccacgaacatcacccgactgctcgacctccccggc
ccctggctgttccagaccgtggacgaaggcggcgcgcgccgacgcgtgcgcagcggcgaa
ctcaacgcctacctcaaggaagtcatcggccccttcaccgccaaggacttccgcacctgg
ggcggcaccctcctcgccgccgaatacctcgccgaagcaggcgtcgccgacaccgaaaaa
caggcccggcagaccctcgtcgactgcgtcaaatacgtcgccgccgacctcggcaacacg
cccgccgtcacccgcagctcctacatctgccccgtcatcttcgaccgctacctcgaaggc
aagatcctcgacgactacgaaccccgcgccacgaagggcgagagcgacctcgacggcctg
acccgcagcgaagctgctctcaagcggctgctggaaagcgagaagaccctcaggacacgg
cggaagaaagcggcgtag
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integrated database retrieval system
