Deinococcus actinosclerus: AUC44_03735
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Entry
AUC44_03735 CDS
T04259
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dab
Deinococcus actinosclerus
Pathway
dab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AUC44_03735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dab03021
]
AUC44_03735
03400 DNA repair and recombination proteins [BR:
dab03400
]
AUC44_03735
Enzymes [BR:
dab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AUC44_03735
Transcription machinery [BR:
dab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AUC44_03735
DNA repair and recombination proteins [BR:
dab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AUC44_03735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RPOC_hybrid
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ALW88117
LinkDB
All DBs
Position
complement(777842..782461)
Genome browser
AA seq
1539 aa
AA seq
DB search
MKDFNKVRIAIASPEKIREWSFGEVEKPETINYRTLKPEREGLFDERIFGPQKDYECACG
KYKRQRYEGKVCERCGVEVTSSKVRRYRMGHIDLATPAAHIWYVKDTPSKIGTLLDLSAG
QLEKVLYFSSFLVTDPRNAQKDGRPLKRGELLSDDEYRELRFGRQETYSIPNGTDAEIRD
GEYVTRGQILGGNVVSKMDGLAQYRFPRRAIIAYSEEVEATLPVPAEALVEQDTFRAGEI
LAELESDVTITAPIDGTVVLHEMGEDSVMVELREGVDEEGTPSGEVLARVYIPHGMNVQV
VHGEIIEAGATLADAASGTRLRVSRDSRLSGVTFPKKKGDVQVTAHWTRRAEYPINPTMH
VLIGDGSEVKKGQKVVGAIDKEEEIVADADGTITLHNPASIIVSKAKVYAYNDEPLVVNG
DRVEPGDELADGGDLRSEISGRIEIDLVRKQVRVIESYDFDAKMGAEAVKELLDDLNLDE
LEVELNEMMKDSSRHKRAKARKRLEVTRAFKRSGNHPSWMILNTVPVMPPDLRPMVQVDG
GRFATSDLNDLYRRLINRNNRLKKLMSQGAPDMIIRNEKRMLQEAVDALIDNGRRGSPVT
NPGSDRSLRSLTDLLGGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGVPKRMALEL
FKPFLFKVLEEKGEVTNIKQARKMLERYRDTRDSVWDALEEVIEDKVVLLNRAPTLHRLG
IQAFEPVLVEGQSIQLHPLVCEAFNADFDGDQMAIHVPLSAQAQAEARIQMLSAHNLLSP
ANGEPNVKPSRDIILGIFTLTLLRKDNLGAGSEFADEQAALAALEGGKVALNSPIVVAGQ
ETSPGRLKYIFSNPDEAVMAVERGEIDHQDYVRIRLNGVTYDTSAGRVMFRRIVQEALGM
QAHLVDTLVNLETAYEKDHLKDMVMACFKHLGIEATAGLLDGLKDAGFKLSTTSGITIGI
DDIVIPPAKTEILAEADAKVAEIEQNFEFGFMTEEERYKQVVQLWNDTKDEVKNAMFDNF
GKNYPFNPLWIMSLSGARGNAQQITQLAGMRGLMARPDGSTIEVPIRASFREGLSVLEYF
ISTHGARKGGADTALRTADSGYLTRKLVDVAHEVVVRDVDCGTTDYTVMPLGATDERTGE
WRTRKSSEIETSIYGRTLSDAVEVDGRTIEAGEMLSLEDVKAITKNAKALQSVFIRTPLN
CRVKSGVCQKCYGYDLSQAKPVSMGEAVGVVAAESIGEPGTQLTMRTFHTGGVAGSGGGD
ITMGLPRVIELFEARKPKTSAAVADRDGVVRIEEDEERYLVRIEADDDQYSSKTAMKISK
GLRMIVKDGDRVEAGQPLTRGAINPHDLLLYKDTDAAQRYLVEEVQRVYRSQGVKVHDKH
IEVIVRQMLRWVEITDGGDTELLEGQTVERWEVDQANDLLGEGQTPSSWKPVLLGITKSS
LTTKSWLSAASFQHTTHVLTEASMKGQVDDLIGLKENVILGKLIPAGTGLQTVRDMQVAD
ERTLEKYGEGSTSTDSVTGNRSYDDTRPGVVNENVTYTN
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttcaacaaagttcgtatcgccatcgccagcccggagaagatccgcgagtgg
tcgttcggtgaggttgaaaagcccgaaaccatcaactaccgcaccctgaaacccgagcgc
gagggtctgttcgacgagcgcatcttcgggccgcagaaggactacgagtgcgcctgcggg
aagtacaagcgtcagcgctacgagggcaaggtctgcgagcgctgcggcgtggaagtcacg
agcagcaaggtgcgccgctaccgcatgggtcacatcgacctcgcgacgcccgccgcgcac
atctggtacgtcaaggacacgcccagcaagatcggcacgctgctcgacctctcggccggt
cagctggagaaggtgctgtacttcagctccttcctggtcaccgacccccgcaacgcccag
aaggacggccgtcccctcaagcgcggcgaactgctgagcgacgacgagtaccgtgaactg
cgcttcggccgtcaggaaacgtactccatccccaacggcaccgacgccgagatccgcgac
ggcgagtacgtcacgcgcggccagatcctgggcggcaacgtcgtcagcaagatggacggc
ctggcgcagtaccgcttcccccgccgcgcgatcatcgcgtacagcgaggaagtcgaggcg
accctgcccgtgcccgccgaggcgctggtcgagcaggacaccttccgcgccggtgagatc
ctcgccgaactggaaagcgacgtcacgatcaccgcgcccatagacggcaccgtcgtgctg
cacgagatgggcgaggacagcgtcatggtcgagctgcgcgagggcgtggacgaggaaggc
acccccagcggtgaagtcctggcccgcgtgtacatcccgcacggcatgaacgtgcaggtc
gtgcacggcgagattatcgaggccggcgctaccctggccgacgccgcctcgggcacccgc
ctgcgcgtcagccgcgacagccgcctgtcgggcgtcaccttccccaagaagaagggcgac
gtgcaggtcacggcgcactggacgcgccgcgccgagtaccccatcaaccccaccatgcac
gtcctgatcggggacggcagcgaggtcaagaagggccagaaggtcgtgggcgcgatcgac
aaggaagaggagatcgtcgcggacgccgacgggaccatcaccctgcacaaccccgccagc
atcatcgtcagcaaggcgaaggtttacgcgtacaacgacgagcccctcgtcgtgaacggt
gaccgtgtcgagcccggtgacgaactcgccgacggcggcgacctgcgcagcgagatcagc
ggccgcatcgagatcgacctcgtgcgcaagcaggtgcgcgtcatcgagtcctacgacttc
gacgccaagatgggcgccgaggccgtcaaggaactgctcgacgacctgaacctcgacgag
ctggaagtcgagctgaacgagatgatgaaggactccagccgccacaagcgcgccaaggcc
cgcaagcgcctggaagtgacccgcgcgttcaagcgcagcggcaaccaccccagctggatg
atcctgaacaccgtgccggtcatgcccccggacctgcgcccaatggtgcaggtggacggc
ggccgcttcgcgacctcggacctgaacgacctgtaccgccgcctgatcaaccgcaacaac
cgcctgaagaagctcatgagccagggcgcgccggacatgatcatccgcaacgagaagcgc
atgcttcaggaagcggtggacgccctgatcgacaacggccgccgcggcagccccgtcacg
aaccccggctccgaccggtccctgcgctccctgaccgacctgctcggagggaaacagggc
cgcttccgccagaacctgctgggtaaacgcgtggactactccggccgaagcgtgatcgtg
gtcggcccgcagctgaaactccaccagtgtggggtgcccaagcgcatggcgctcgaactc
ttcaagcccttcctgttcaaggtgctcgaggagaagggcgaggtcacgaacatcaagcag
gcccgcaagatgctcgaacgctaccgcgacacccgcgacagcgtctgggacgccctggaa
gaggtcatcgaggacaaggtcgtgctgctcaaccgcgcgcccaccctgcaccgactgggc
atccaggccttcgagccggtgctggtggaaggtcagtccatccagctgcacccgctggtc
tgtgaagccttcaacgccgacttcgacggcgaccagatggccatccacgtccccctgagc
gcccaggcgcaggccgaggcgcgcatccagatgctcagcgcgcacaacctgctgtccccc
gcgaacggcgagccgaacgtcaagcccagccgcgacatcatcctggggatcttcaccctg
accctgctgcgcaaggacaacctcggcgcgggcagcgaatttgccgacgagcaggccgcc
ctggccgccctcgaaggcgggaaggtcgcgctgaacagcccgatcgtcgtggccggtcag
gagaccagtcccggccgcctgaagtacatcttcagcaaccccgacgaggccgtcatggcc
gtcgaacgcggcgagatcgaccaccaggactacgtccgcatccgcctgaacggcgtcacc
tacgacaccagcgcgggccgcgtgatgttccgccggatcgtgcaggaagccctgggcatg
caggcgcacctcgtggacaccctcgtgaacctcgagaccgcctacgagaaggaccacctc
aaggacatggtcatggcgtgcttcaagcacctcgggatcgaggcgaccgccgggctgctc
gacggcctgaaggacgcgggcttcaagctctccacgacctccggcatcaccatcggcatc
gacgacatcgtcatcccgcccgccaagaccgagatcctggccgaagcggacgccaaggtc
gccgagatcgagcagaacttcgagttcggcttcatgaccgaagaagagcgctacaagcag
gtcgtgcagctctggaacgacacgaaggacgaagtcaagaacgccatgttcgacaacttc
ggcaagaactaccccttcaaccccctgtggatcatgagcctctccggcgcccgtggtaac
gcgcagcagatcacgcagctcgccggaatgcgcggcctgatggcccgccccgacggcagc
accatcgaagtgccgatccgcgccagcttccgcgagggtctgtcggtgctggaatacttc
atctccacccacggcgcccgtaagggtggcgcggacaccgcgctgcgtaccgccgactcc
ggctacctgacccgcaaactggtcgacgtggcccacgaagtcgtcgtgcgcgacgtggac
tgcggcaccaccgactacaccgtcatgcccctgggcgcgaccgacgagcgcaccggcgag
tggcgcacccgcaagagcagcgagatcgagaccagcatctacggccgcaccctgtccgac
gcggtcgaggtcgacgggcgcaccatcgaagcgggcgagatgctctccctggaagacgtc
aaggcgatcaccaagaacgccaaggccctccagagcgtgttcatccgcacgcccctgaac
tgccgcgtcaagagcggcgtgtgccagaagtgctacggctacgacctctcgcaggccaaa
cccgtcagcatgggcgaagcggtcggcgtcgtcgccgccgaatccatcggcgagcccggc
acgcagctcaccatgcgcaccttccacaccggcggggtcgccggcagcggcggcggggac
atcaccatgggtctgccccgcgtgatcgaactgttcgaagcccgcaagcccaagacctcg
gcggccgtggccgaccgtgacggcgtggtgcgcatcgaggaagacgaggaacgctacctc
gtgcgcatcgaggccgacgacgaccagtactccagcaagaccgccatgaagatcagcaag
ggcctgcgcatgatcgtcaaggacggcgaccgcgtcgaagccggtcagcccctcacgcgc
ggcgccatcaacccgcacgacctcctgctgtacaaggacaccgacgccgcccagcgctac
ctggtggaagaagtgcagcgcgtgtaccgcagccagggcgtgaaggtgcacgacaagcac
atcgaagtcatcgtgcgccagatgctccgctgggtcgagatcaccgacggcggcgacacc
gaactgctcgaagggcagaccgtggaacgctgggaagtcgatcaggccaatgacctgctc
ggggaaggccagacccccagctcctggaagcccgtcctgctgggcatcaccaagagcagc
ctgaccaccaagagctggctgtccgccgcgagcttccagcacaccacccacgtgctgacc
gaggccagcatgaagggccaagtcgacgacctgatcggcctgaaggagaacgtcatcctc
gggaagctgattcccgccgggacgggcctccagacggtgcgggacatgcaggtcgccgac
gagcgcaccctcgagaagtacggcgagggcagcaccagcacggactccgtgaccggcaac
cgcagctacgacgacacccgccccggcgtcgtcaacgagaacgtcacctacaccaactaa
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integrated database retrieval system
