Deinococcus actinosclerus: AUC44_04790
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Entry
AUC44_04790 CDS
T04259
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
dab
Deinococcus actinosclerus
Brite
KEGG Orthology (KO) [BR:
dab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dab03019
]
AUC44_04790
Enzymes [BR:
dab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
AUC44_04790
Messenger RNA biogenesis [BR:
dab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AUC44_04790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
CON_HrpB
Helicase_C
DEAD
HA2_N
AAA_30
AAA_19
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ALW88294
LinkDB
All DBs
Position
993057..995549
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AA seq
830 aa
AA seq
DB search
MRGVKLPIEEVTGEVRAALAAHPLVVVQAPPGAGKSTGLPLALLDEPWLAGQGVVMLQPR
RVAARAVASRLAEGLGEEVGGTVGYRVRFDSRVSAATRLEVVTEGILTRRLQRDPELSGV
GLVILDEFHERSLNADLALALLREVQGALRDDLRVLVMSATLDPALPGRLGAPLVESAGR
AYPVDVRYLPTDPVGRVEELVARQVRAALDAEPGDVLAFLPGVREIRAAAALLSGVDAVV
LPLYGDLPVREQARALRPDPDGRRKVVLATSIAETSLTIDGVRVVVDGGLSRTQAFDPAT
GLTRMVTGRVTRDAATQRAGRAGRTAPGVAYRLWSERTQPLLPAARAPEVLDSDLAPLTL
ELAQWGVTDPATLHWLDVPPERRVQTARDVLQGLGALDDAGRVTPEGARLLDFPTHPRVS
HLLTTPGDPALAADVAALLEERDPLPNGSGADLTDRARALRAWRRKDHSGGDVAVLERVE
RLSRQWRTLLKVRPDDRDPDPFAVGALVARAYPERAALAREETSGLRRGRFLLAGGQGAA
LPEGDALAGARALAVAHLDAAQAEGRIFLAAPLDPAALDAGAAWVDAVRWDARTGTLVAQ
RERRFGALVLETRPLRDLPAAARVDALAAAIRDEGLHLLTFSPDAQALRDRVESVRAWRS
PSAGSTEDWPDLSDAALLGTLEHWLGPHLDGVRSRDDLARVNLLPALQARLPWPLPARLD
ELAPTHLTVPTGSRVRLTYRPGEAPILAVKLQELFGLADTPSVNEGRTPVLLHLLSPAGR
PVQVTQDLRSFWNSSYFEVRKDLRGRYPKHPWPDDPWTHAPMKGTKKRGV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgtgaagttgccgatcgaggaggtcacgggggaggtgcgcgcggcgctcgcg
gcgcatcccctggtggtcgtgcaggccccgccgggcgcgggcaagagtacggggttgccg
ctggcgctgctggacgagccgtggctggccgggcagggcgtcgtgatgctccagccccgg
cgggtcgcggcccgcgcggtcgcgtccaggctggcggaaggtctgggagaggaggttggc
ggcacggtcgggtaccgcgtgcgcttcgactcgcgcgtgtcggccgccacacggctggag
gtcgtcaccgagggcatcctgacccgccgcctgcaacgcgacccggaactgtccggcgtg
gggctggtgatcctggacgagttccacgagcgcagtctgaacgccgatctggcgctggcg
ctgctgcgcgaggtgcagggggcgctgcgggacgacctgcgggtgctggtcatgagcgcc
acgctggacccggcgctgcccgggcggctgggcgcgcccctggtcgagagcgcgggccgc
gcgtacccggtggacgtccggtacctgccgaccgacccggtgggccgcgtggaggagctg
gtggcgcggcaggtgcgcgccgcgctggacgccgaaccgggggacgtgctggcgttcctg
cccggcgtgcgcgagatccgcgccgccgccgcgctgctctccggcgtggacgccgtggtg
ctgcccctgtacggcgacctgccggtgcgcgagcaggcccgcgcgctgcgccccgacccg
gacgggcggcgcaaggtggtcctggcgaccagcatcgcggagacgtccctgaccatcgac
ggcgtgcgcgtcgtggtggacggcggcctgagccgcacgcaggcgttcgacccggcgacc
ggcctgacccgcatggtcaccggccgcgtcacgcgcgacgccgccacgcagcgcgcgggc
cgcgcgggccgcaccgcgccgggcgtcgcgtaccgcctctggagcgaacggacccagccg
ctgctacccgccgcccgcgcgccggaggtgctggactcggacctcgcgccgctgacgctg
gaactcgcgcagtggggcgtgaccgaccccgcgaccctccactggctggacgtcccgccg
gaacgccgcgtgcagaccgcgcgggacgtgctgcaagggctgggcgccctggacgacgcg
ggccgggtgacgccggagggcgcgcgcctgctggacttccccacgcacccgcgcgtgtcg
cacctgctgaccacgccgggcgaccccgcgctggcggcggacgtggcggcgctgctggag
gaacgcgacccgctccccaacggctccggcgcggacctcaccgaccgggcgcgtgccctg
cgcgcctggaggcgaaaagatcacagcgggggagacgtcgccgtgctggagcgggtggag
cggctctcgcgccagtggcgcaccctcctgaaggtccgccccgacgaccgcgacccagac
ccgttcgcggtgggggcgctggtggcccgcgcgtacccggaacgcgccgcgctggcccgc
gaggagaccagcggcctgcgccgggggcgcttcctgctcgcgggcggtcagggcgccgcg
ctgcccgagggggacgccctggccggagcgcgcgcgctggccgtcgcgcacctcgacgcc
gcgcaggccgagggccgcatcttcctggccgccccgctcgacccggccgcgctggacgcc
ggggccgcgtgggtggatgccgtgcgctgggacgcccgcaccggcaccctcgtcgcgcag
cgggaacggcgcttcggcgcgctggtgctcgaaacgcggcccctgcgggacctgccggcc
gccgcccgcgtggacgccctggccgccgcgatccgcgacgagggcctgcaccttctgacc
ttcagcccggacgcgcaggcgctgcgcgaccgcgtggagtccgtgcgcgcgtggcgatca
ccgtcagcgggcagcacggaagactggccggacctgagcgacgccgcgctgctcggcacg
ctggagcactggctcggcccgcacctggacggcgtgcgcagccgtgacgacctcgcgcgc
gtgaacctcctcccggccctccaggcccggctgccctggccgctccctgcccggctggac
gagctggcccccacgcacctgaccgtgcccaccggcagccgcgtccgcctgacctaccgc
cccggcgaggcacccatcctggccgtgaagctccaggaactgttcggactggccgacacg
cccagcgtgaacgagggccgcacgcccgtcctgctgcacctgctctcgcccgccgggcga
cccgtgcaggtcacgcaggacctgaggtcgttctggaactcctcgtacttcgaggtgcgc
aaggacctgcgcggccgctaccccaaacacccctggcccgacgatccctggacccacgcc
cccatgaagggcacgaagaaacgcggcgtgtga
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