Deinococcus actinosclerus: AUC44_05490
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Entry
AUC44_05490 CDS
T04259
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dab
Deinococcus actinosclerus
Brite
KEGG Orthology (KO) [BR:
dab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dab03032
]
AUC44_05490 (gyrB)
03400 DNA repair and recombination proteins [BR:
dab03400
]
AUC44_05490 (gyrB)
Enzymes [BR:
dab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AUC44_05490 (gyrB)
DNA replication proteins [BR:
dab03032
]
Prokaryotic type
DNA Topoisomerases
AUC44_05490 (gyrB)
DNA repair and recombination proteins [BR:
dab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AUC44_05490 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ALW88412
LinkDB
All DBs
Position
complement(1138741..1140747)
Genome browser
AA seq
668 aa
AA seq
DB search
MTQTDDTVKDIATTAGPSAEYTAADISVLEGMDAVRKRPGMYVQGGTGIDGYHQLLTEII
DNGIDEGLANFATEIHVILHADGAATVTDNGRGIPIDIMQSKGRPAIEVIFSELHAGGKF
GQGAYKVSGGLHGVGSTVVNALSLYLDVTVNKHGHLHNVRFEKGILVKPLRDEGPTPKDV
TWATSVSFHPDPSIFKEFDNQFNYDRIRNRLRELAYLTGLKIVIRDERVDLHAGQIKEET
FHEKGGIANFARALVTDDSKLLYDQPIVMTGQHSGVNVKVAFIHANTYASDNILTYANMI
RTRDGGTPLTGFKTAYTRILNKYAKDKNLIKNGNPVPSGDDLLEGIYCVVSVEVEDPQFE
SQAKVKLLNSEAQTAVNAVVGEKFAEFLEENPKVGKTIVEKAAEAARAREAARKARDIVR
RSNPLENDDLPGKLADCSSQDPAESELFIVEGISAGGSAKGGRERRFQAILPLRGKILNV
EKAELNKILKNAEIRALIGAIGAGVEGTGDRMHFDLSNLRYHKIIIMTDADMDGGHIATL
LLTFFYRYMRPVVEAGYLYIAQPPLYRIMIGREKKGTYLYTNEDLKEHVARANKEGKKYD
IQRFKGLGEMNADQLWDTTMNPETRALKRVGIEDLIVANEVFENLMGSDVAPRKTFIQEN
ARFAEISV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgacccagaccgacgacactgtgaaagacatcgccaccaccgccggccccagcgccgag
tacaccgccgccgacatcagcgtcctcgagggcatggacgccgtacgcaaacgccccggc
atgtacgtgcagggcggcaccggcatcgacggctaccaccagctcctcaccgagatcatc
gacaacggcatcgacgagggcctcgccaacttcgccaccgagatccacgtcatcctgcac
gccgacggcgccgccaccgtcaccgacaacggccgcggcatccccatagacatcatgcag
agcaagggccgccccgccatcgaggtcatcttcagcgaactgcacgccggcggcaaattc
ggccagggcgcgtacaaggtctccggcggcctgcacggcgtcggcagcaccgtcgtgaac
gccctgagcctctacctcgacgtcaccgtcaacaagcacgggcacctgcacaacgtccgc
ttcgaaaagggcatcctcgtcaaacccctgcgcgacgaaggccccacgcccaaggacgtc
acctgggccaccagcgtcagcttccacccggatcccagcatcttcaaggaattcgacaac
cagttcaactacgaccgcatccgcaaccgcctgcgcgaactggcgtacctgacgggcctg
aagatcgtcatccgcgacgaacgcgtggacctgcacgccgggcagatcaaggaagagacc
ttccacgagaagggcggcatcgccaacttcgcccgcgcgctcgtcaccgacgacagcaaa
ctgctgtacgaccagcccatcgtcatgaccggccagcacagcggcgtgaacgtcaaggtc
gcgttcatccacgcgaacacctacgccagcgacaacatcctcacctacgcgaacatgatc
cgcacccgcgacggcggcacgcccctgaccggcttcaagaccgcgtacacccgcatcctg
aacaagtacgccaaggacaagaacctcatcaagaacggcaatcccgttcccagcggcgac
gacctcctcgaagggatctactgcgtcgtcagcgtcgaggtggaagacccgcagttcgaa
tcccaggcaaaggtcaagctgctgaacagcgaggcgcagaccgccgtgaacgccgtcgtc
ggcgagaaattcgccgagttcctcgaggagaaccccaaggtcggcaagaccatcgtcgag
aaggccgccgaagccgcccgcgccagagaagccgcccgcaaggcccgcgacatcgtccgc
cgcagcaacccgctggaaaacgacgacctgcccggcaaactcgccgactgctcctcgcag
gaccccgctgaaagcgagctgttcatcgtcgaaggtatctccgccggcggcagcgccaag
ggcggccgtgaacgccgcttccaggcgatcctcccgctgcgcggcaagatcctcaacgtc
gagaaggccgaactcaacaagatcctcaagaacgccgagatccgcgccctgatcggcgcc
atcggcgccggcgtcgaaggcaccggcgaccgcatgcacttcgacctttcaaacctccgc
taccacaagatcatcatcatgaccgacgcggacatggacggtggccacatcgccaccctc
ctcctgaccttcttctaccgctacatgcgccccgtcgtcgaggccggctacctgtacatt
gcccagccgcccctctaccgcatcatgatcggccgcgaaaagaaaggcacgtacctctac
accaacgaggacctcaaggaacacgtcgcccgcgccaacaaagaaggcaagaagtacgac
atccagcgcttcaagggcctcggcgagatgaacgccgaccagctctgggacaccaccatg
aaccccgaaacccgcgccctcaagcgcgtgggcatcgaagacctcatcgtcgccaacgaa
gtcttcgagaacctgatgggtagtgacgtcgccccgcgcaagaccttcatccaggaaaac
gcgcgcttcgccgaaatcagcgtgtaa
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