Deinococcus actinosclerus: AUC44_12905
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Entry
AUC44_12905 CDS
T04259
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dab
Deinococcus actinosclerus
Pathway
dab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AUC44_12905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dab03021
]
AUC44_12905
03400 DNA repair and recombination proteins [BR:
dab03400
]
AUC44_12905
Enzymes [BR:
dab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AUC44_12905
Transcription machinery [BR:
dab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AUC44_12905
DNA repair and recombination proteins [BR:
dab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AUC44_12905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
RNA_pol_L_2
IMS_HHH
RAD51D_N
DUF5805
Motif
Other DBs
NCBI-ProteinID:
ALW89686
LinkDB
All DBs
Position
complement(2649501..2650502)
Genome browser
AA seq
333 aa
AA seq
DB search
MDQKRPQLKARVDGDYGEFVLEPLTRGYGVTIGNPIRRILMSSIPGTAVTSVYIEDVLHE
FSTIPGVKEDVIQIILNLKELVVKFHATGPKTLTLRAQGEGVVKASAFEVPSDAEIVNPD
LVIANLAEDGKLVMEVRIEEGEGYVPADKHATKDRINSIPVDAMFSPVRRVAYHVENTRV
GQQTDLDRLILRVWTDGSTSPQDTLDKAVEILRDELTVFGNVETLPAAAPEYQQPVYTPA
PTAPNVYDLPPSTASLNLNPGDYPAEMDSPRVTLEGLGLTTRVLHSLKEEGIDSVDALCA
LSDRDLKKVPGIGERSLDEIKQQLAQFGLALRD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtggatcaaaagcgccctcaactcaaggcccgtgtggacggcgactacggcgagttcgtc
ctggaaccgctcacccgcggctacggcgtcaccatcgggaaccccatccggcgcatcctg
atgtcctccatccccggtaccgctgtgaccagtgtgtacattgaggacgtcctgcacgag
ttctccaccatccccggcgtcaaggaagacgtcatccagatcatcctgaacctcaaggaa
ctcgtggtgaaattccacgcgaccggccccaagaccctcaccctgcgcgcgcagggcgaa
ggcgtcgtcaaggccagcgccttcgaggttcccagcgacgccgagatcgtcaaccccgac
ctggtcatcgccaacctcgccgaggacggcaaactggtcatggaagtgcggatcgaggaa
ggcgaaggctacgtccccgcggacaagcacgccaccaaggaccgcatcaactcgatcccc
gtcgacgcgatgttctcccccgtgcgccgcgtggcgtaccacgtcgagaacacccgcgtg
ggccagcagactgacctggaccgcctgatcctgcgcgtctggaccgacggcagcaccagc
ccccaggacaccctggacaaggctgttgaaatcctgcgtgatgaactcacggtgttcggc
aacgtggagaccctccccgccgccgcgcccgagtatcagcagcccgtctacacccccgcg
cccaccgcgccgaacgtgtacgacctgccgcccagcaccgccagcctgaacctgaacccc
ggcgactaccccgccgagatggactcgccccgcgtgaccctcgagggtctgggcctcacc
acccgcgtgctgcactccctgaaggaagaaggcatcgacagcgtggacgccctgtgtgct
ctgtccgaccgtgacctgaagaaggtccccggcatcggtgagcgcagcctcgacgagatc
aagcagcaactcgcccagttcggcctcgccctgcgcgactga
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