Delftia acidovorans: Daci_0141
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Entry
Daci_0141 CDS
T00620
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dac
Delftia acidovorans
Pathway
dac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Daci_0141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dac03019
]
Daci_0141
03400 DNA repair and recombination proteins [BR:
dac03400
]
Daci_0141
Enzymes [BR:
dac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Daci_0141
Messenger RNA biogenesis [BR:
dac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Daci_0141
DNA repair and recombination proteins [BR:
dac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Daci_0141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ABX32787
UniProt:
A9BQT5
LinkDB
All DBs
Position
complement(153096..155129)
Genome browser
AA seq
677 aa
AA seq
DB search
MAAVAASGPQRIFCGKRPHPAPSRASRLCRKKSPLSAAHSVLQAVFGYEQFRGPQEAIVS
HVVAGGDALVLMPTGGGKSLCYQVPAIVRQQQGHGVAVVVSPLIALMHDQVGALHEAGVS
AAYLNSTLSYDETQEVEWRLQSGDITLLYAAPERLNTPRFLGLLDDLHAQGKLSLFAIDE
AHCVSQWGHDFRPEYRALSVLHERYAGVPRIALTATADALTRADIVERLQLESARHFVSS
FDRPNIRYRIAEKKDVSNQLLRFIEREHEGEAGVVYCQSRKRVEELAQTLSQAGVPALPY
HAGLPFETRQLHQDRFLREDGIVIVATIAFGMGINKPDVRFVAHVDMPKNIEGYYQETGR
AGRDGLPADAWMAYGLSDVVNQRRMIDESPAEDTFKQVMRGKLDALLGLAEATDCRRVRL
LAYFGEQYGLGAPGEDAETDLEGRPLQRVAKTACGNCDNCMEPPALWDGTDAARKLLSTI
YRVHEASQLTFGAGHIMDVLRGKDTEKVRQYGHDKISTFGLGKDYSEPQLRGVMRQLLAT
GALGLHKITSENSGHSFDTLCLADGSRDVLRGNVPVQLREAVAAPRTRTSKRATQPNAAA
ASLGPDAQVRFINLKAWRAEVAREHNLPAYVIFHDATLAAIAERNPASLDDLQGISGMGA
KKLDAYGAEVLRVVATG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgttgcggcctccgggccgcagcgcattttttgcgggaagcgcccgcatccc
gctccctcccgcgccagccgcctctgccgaaagaagtccccgttgtccgccgcgcattcc
gtcctgcaagccgtgttcggctacgaacaattccgcggtccgcaggaggccatcgtctcg
cacgtggtcgccggcggcgatgcgctggtgctcatgcccacgggcggcggcaagagcctg
tgctaccaggtgccggccatcgtgcgccagcagcagggccacggcgtggcggtggtggtg
tcgccgctgatcgcgctcatgcacgaccaggtgggcgcgctgcacgaggccggcgtgagc
gccgcctacctgaactccacgctgtcctatgacgagacgcaggaagtcgaatggcgcctg
caaagcggcgacatcacattgctgtatgccgcgcccgagcgcctgaacacgccgcgcttc
ctgggcctgctcgacgacctgcatgcccagggcaagctgtcgctgttcgccatcgacgag
gcgcactgcgtgagccagtggggccatgacttccggcccgagtaccgcgcgctgagcgtg
ctgcacgaacgctatgcgggcgtgccgcgcattgcgctcacggccacggccgacgcactc
acgcgcgccgacatcgtcgagcggctgcagctggagagcgcacggcacttcgtcagcagc
ttcgaccgccccaacatccgctaccgcatcgccgagaagaaggacgtcagcaaccagctg
ctgcgcttcatcgagcgcgagcacgagggcgaggccggcgtggtctattgccagtcgcgc
aagcgcgtggaggagctggcccagacgctgagccaggccggcgtgcccgccctgccctac
cacgcgggcctgcccttcgagacgcgccagctgcaccaggaccgcttcctgcgcgaggac
ggcatcgtcatcgtggccaccatcgccttcggcatgggcatcaacaagcccgatgtgcgc
ttcgtggcccacgtggacatgcccaagaacatcgagggctactaccaggaaaccggccgc
gcaggccgcgacgggctgcccgccgatgcctggatggcctacggcctgtccgacgtggtc
aaccagcgccgcatgatcgacgaaagcccggccgaggacaccttcaagcaggtcatgcgc
ggcaagctcgatgccctgctgggcctggccgaggccacggactgccgccgcgtgcggctg
ctggcctacttcggcgagcagtacggcctgggcgcaccgggagaagacgcagagacggac
cttgaaggcaggccgctgcagcgcgtggcaaagaccgcctgcggcaactgcgacaactgc
atggagcccccggccctgtgggatggcacggacgccgcgcgcaagctgctgtccaccatc
taccgcgtgcacgaggccagccagctgacctttggcgcgggccacatcatggacgtgctg
cgcggcaaggacaccgagaaggtgcgccagtacggccacgacaagatctccaccttcggc
ctgggcaaggactacagcgagccccagctgcgcggcgtgatgcgccagctgctggccacg
ggcgccctgggcctgcacaagatcaccagcgagaacagcggccacagcttcgacacgctg
tgcctggccgatggctcgcgcgacgtgctgcgcggcaacgtccccgtgcagctgcgcgag
gccgtggccgcgccgcgcacgcgcacctccaagcgcgccacccagcccaacgcggccgcc
gccagcctgggccccgacgcccaggtgcgcttcatcaacctcaaggcctggcgcgccgag
gtcgcgcgcgagcacaacctgcccgcctacgtcatcttccacgacgccacgctggccgcc
attgccgaacgcaacccggcctcgctggacgacctgcagggcatcagcggcatgggcgcc
aagaagctcgacgcctatggcgccgaggtgctgcgggtggtggccacgggttga
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