Delftia acidovorans: Daci_0520
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Entry
Daci_0520 CDS
T00620
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dac
Delftia acidovorans
Pathway
dac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Daci_0520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dac03400
]
Daci_0520
Enzymes [BR:
dac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Daci_0520
DNA repair and recombination proteins [BR:
dac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Daci_0520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABX33166
UniProt:
A9BRA8
LinkDB
All DBs
Position
555532..559056
Genome browser
AA seq
1174 aa
AA seq
DB search
MASHWQPGLIALHGNQTEVLADTVLAWLAAHPLDVLEPEVVLVQSNGMAEWFKMRMAEQL
GVCAAARVELPARFVWRSYRQVLGRQAVPRESPLDKTPMTWRLMRLLPQCLHDPAFAPIA
GFLRPGEPERLLQLAQRLADLFDQYQIYRADWLDAWEAGHDVLPMPLRPGVADATVPEGQ
QWQPRLWRAVLAELDEDQRGATRARLQGRVLAALQSGEAPAAPLARRVVVFGISQLPLSL
LEFLAAMARHSQVLLAVPNPCRFHWADAIDGRELLRMARRRQPLRGGRDLAQLPLEAMHA
HAHPLLAAWGRQSRDYVRQLDAFDTTGAAAQLQMPRVDLFDETDAEDLRTAPLLAQVQQR
IRDLVPLAEHPPLEVARADRSIVFHSAHSVVRELEVLHDQLLQMLARPPDPAQPGQAPLA
PRDVVVMLPSIETAAPSIRAVFGQYGRHDPRHIPFDIADLGARASSPLAVALQWLLRLPQ
QRCRLSELCDLLDVPAIAARMGLAADDLPQLTRWMAGAGIRWGLNAPQRGALGLQACGEH
NSAWFGLQRMLLGYAGGVAQDGQAFGGIEPYDEVGGLSAELAGVLAALLERMLAWWREAG
RPATPEAWAQRFRALLQDFFKAQDDEDEAMLAALDAALTDWQRACEQAGYADAVELGVAQ
EAWMQALEQPSLSQRFRAGGVTFCTLMPMRAIPFEVVCLLGMNDGDYPRRATRSDFDLMA
LPGQQRPGDRARRDDDRQLMLEALLSARRALYISWTGHHVRDNSEQPPSVLVSQLRDYLE
TGWRGEGGQPLLAQRTQQHPLQPFSRRYFEEGSPWTTYAREWRAAHAQSDGTDVLPALPA
QPRPPFVPDASAPLTLARLTDFLRHPARAYLRQRLQVRFEQEDNPVVDEELFQLDGLTEY
LLVQQLQQQVAAGLDEPGQAPQAMEDSVRAAVARLTRSGRLPLAGLGERGARALQSSVTP
SLRAWRQQLDRYAHPAPRRRLLIEDDGLVFDDWIDGLRQSCETEESPDADDAQCWLLLDP
RNLLNAKGRPHADKLMPVYLRSLALAASGSQAELRVVARDGLVQVLPMDPSEALTRLREL
MALWREGQNGPLPLPLRSGLAMAEGFPAAAQQAYEGGHLVGGEGEDPSWARCYPDFERLS
ADGRFEALAHAAHAPLLDWVAAQVQVLPYQGDAQ
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
gtggcatcgcattggcagccgggcttgatcgccctgcacgggaatcagacggaggtgctg
gccgacacggtgctggcatggctggctgcgcacccgctggatgtgctggagcccgaggtg
gtgctggtgcagagcaacggcatggccgagtggttcaagatgcgcatggccgagcagctg
ggcgtgtgcgccgccgcgcgcgtggaactgcccgcgcgctttgtgtggcgcagctaccgc
caggtgctgggccgccaggccgtgccgcgcgaatcgcccctggacaagacgcccatgacc
tggcggctcatgcgcctgctgccgcagtgccttcatgaccccgccttcgcccccattgca
ggctttctgcgccccggcgagcccgagcggctgctgcaattggcccagcgcctggccgac
cttttcgaccaataccagatctaccgcgccgactggctggacgcctgggaggccgggcat
gacgtgctgcccatgcccttgcgccctggtgtggcggacgccacggtgcccgaaggccag
cagtggcagccgcgcctgtggcgcgccgtgctggccgagctggacgaggaccagcgcggc
gccacgcgcgcgcgcctgcagggccgggtgctggccgcgctgcagtccggcgaggcgccg
gccgcgccgctggcacgccgcgtggtggtgttcggcatcagccagctgccgctgagcctg
ctggaattcctggccgccatggcccgccacagccaggtgctgctggccgtgcccaatccc
tgccgcttccattgggctgacgccatcgacgggcgcgagctgctgcgcatggcgcggcgc
cgccagccgctgcgcggcgggcgtgatctggcgcagctgccgctggaggccatgcatgcc
cacgcccatccgctgctggccgcctggggccggcaaagccgcgactatgtgcgccagctc
gacgccttcgacaccacgggtgccgccgcgcagctgcagatgccgcgcgtggacctgttc
gacgaaaccgatgccgaggacctgcgcaccgcgccgctgctggcccaggtacagcagcgc
atccgcgacctggtgccgctggccgagcacccgccgctggaggtggcgcgggccgatcgt
tccatcgtctttcacagcgcccacagcgtggtgcgcgaactggaggtgctgcacgaccag
ctgctgcagatgctggcccggccaccggatccagcccagccagggcaagcgccgctggcc
ccgcgtgacgtggtggtcatgcttccgtccatagagacggctgcgccctcgatacgtgcg
gtcttcggccagtacggacgccacgacccgcgccacattcccttcgacatcgccgacctg
ggtgcgcgcgccagcagcccgctggccgtggccctgcaatggctgctgcgcctgccccag
cagcgctgccggctcagcgagctgtgcgacctgctggacgtgcccgcgattgccgcgcgc
atggggctggcggccgacgacctgccccagctcacgcgctggatggccggggccggcatc
cgctggggactcaatgcgccgcagcgcggcgccctgggcctgcaggcctgtggcgagcac
aacagcgcctggttcggcctgcagcgcatgctgctgggctatgccggcggcgtggcgcag
gacggccaggcctttggcggcatcgagccctatgacgaagtgggcggcctgtcggccgag
ctggccggcgtgctggccgcgctgctggagcgcatgctggcctggtggcgcgaggccggg
cggcccgccacgcccgaggcctgggcgcagcgctttcgcgcactgctgcaggacttcttc
aaggcgcaggacgatgaggacgaggccatgctggccgcgctggacgccgccctcacggac
tggcagcgcgcctgcgagcaggccggctacgcggacgccgtggaactgggcgtggcccag
gaggcctggatgcaggcgctggagcagccctcgctgtcgcagcgctttcgcgccggtggc
gtgaccttttgcacgctgatgcccatgcgggccattcccttcgaggtggtctgcctgctg
ggcatgaacgatggcgactatccgcgccgcgccacgcgcagcgacttcgacctgatggcg
ctgcccggccagcagcgccccggcgaccgcgcgcgccgcgacgatgaccgccagctcatg
ctcgaagccctgctgtccgcacgccgcgcgctctacatcagctggaccggccaccatgtg
cgcgacaacagcgagcagccgccctcggtcctggtctcgcagctgcgcgactacctggag
acgggctggcgcggcgaaggcggccagccgctgctggcgcagcgcacgcagcagcacccg
ctgcagcccttcagccgccgctatttcgaagaaggctcgccctggaccacctatgcgcgc
gaatggcgggccgcgcatgcgcagtctgacggcacggacgtgttgcctgcgctgcccgcg
cagccacgcccgccctttgtccccgacgcctcggcgccgctgacgctggcccggctcacc
gatttcctgcgccacccggcgcgcgcctacctgcgccagcgcctgcaggtgcgcttcgag
caggaggacaaccccgtggtggacgaggaactgttccagctcgacggcctgaccgaatac
ctgctggtgcagcagttgcagcagcaggtggcggccggcctggacgagcccgggcaggcg
ccccaggccatggaagacagcgtgcgcgccgccgtcgcgcgcctcacgcgctcggggcgg
ctgccgttggcggggctgggcgagcgcggcgcgcgggcgctgcagtcctcggtcacgcct
tcgctgcgggcctggcgccagcaactggatcggtatgcccatcccgcgccgcgcagacgg
ctgctgatcgaggacgatggcctggtgttcgacgactggatcgacgggttgcgccagtcc
tgcgaaaccgaagagtcccccgatgcggacgacgcacagtgctggctgctgctggacccg
cgcaacctgctcaatgccaagggcaggccccatgccgacaagctcatgccggtctacctg
cgcagcctggcgctggccgccagcggctcgcaggccgagttgcgcgtggtggcgcgcgac
ggcctggtgcaggtgctgcccatggacccttccgaagcgctgacacggctgcgtgaattg
atggccctgtggcgcgaaggccagaacggcccgctgcccctgccgctgcgcagcggcctg
gccatggccgaaggctttcccgctgcggcccagcaggcctatgagggcggtcatctggtc
ggcggcgaaggcgaggacccgtcctgggcccgctgctaccctgacttcgaacgcctgagc
gccgatggccgtttcgaggccctggcccatgccgcccacgcgccgctgctcgactgggtg
gccgcgcaggtgcaggtcctgccgtaccagggggatgcgcaatga
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