KEGG   Delftia acidovorans: Daci_1227
Entry
Daci_1227         CDS       T00620                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
dac  Delftia acidovorans
Pathway
dac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Daci_1227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dac03400]
    Daci_1227
Enzymes [BR:dac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Daci_1227
DNA repair and recombination proteins [BR:dac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Daci_1227
    RecFOR pathway proteins
     Daci_1227
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 nSTAND3 AAA_16 AAA_22 AAA_14 AAA_3 Rad17 AAA_18 TsaE NTPase_1 RNA_helicase DUF815 GGDEF_2 AAA_33 AAA_28 AAA_17 ABC_tran Sigma54_activ_2 NB-ARC AAA_24
Other DBs
NCBI-ProteinID: ABX33871
UniProt: A9BUG8
LinkDB
Position
1367935..1369020
AA seq 361 aa
MSIHTDDFGQGGFAQGGFPPDKAPDKLRMISAAPVSRGEEAMERALRPKLLQEYVGQAKA
REQLEIFIGAARKRNEALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDL
AALLTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTL
VGATTRAGMLTNPLRDRFGIVARLEFYTAEELARIVRRSAGLLNAPIDDEGAFEIARRSR
GTPRIANRLLRRVRDYADVRGDGSITRELADRALAMLDVDPQGFDIMDRKLLEAVVHRFD
GGPVGLDNIAASIGEEAGTIEDVIEPYLIQQGFLQRTPRGRMATQAAYRHLGLPVPGDDA
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgagcatccataccgacgatttcgggcagggcggctttgcgcagggcggcttcccgcca
gacaaggcaccggacaagctgcgcatgatttcggcagcgccggtctcgcgcggggaagag
gccatggagcgtgcgctgcgccccaagctgctgcaggagtacgtgggccaggccaaggcg
cgcgagcagctggagatcttcatcggcgcggcccgaaagcgcaatgaggcgctggaccat
gtgctgctgttcggcccgccgggcctgggcaagaccacgctgtcgcacatcatcgcggcc
gagctgggcgtgaacctgcgccagaccagcggccccgtgctggaaaagcccaaggacctg
gcggcgctgctgaccaacctcgaagccaacgatgtgctgttcatcgacgagatccaccgc
ctgtcgcccgtggtcgaggaaatcctctacccggcgctggaggactaccagatcgacatc
atgatcggcgaggggccggcggcgcgctccatcaagctggacctgcagccgttcacgctg
gtgggcgccaccacgcgcgcgggcatgctgaccaatccgctgcgcgaccgcttcggcatc
gtggcgcggctggagttctatacggccgaggagctggcgcgcatcgtgcggcgcagtgca
ggcctgttgaacgcgcccatcgatgacgagggcgccttcgagatcgcgcgccgctcgcgc
ggcacgccgcgcattgccaaccgcctgctgcgccgcgtgcgcgactatgccgatgtgcgc
ggcgacggcagcatcacgcgcgagctggccgaccgtgcgctggccatgctcgatgtcgat
ccccagggcttcgacatcatggaccgcaagctgctggaggccgtggtgcaccgcttcgac
ggcggccccgtgggcctggacaacatcgcggccagcatcggcgaggaagcgggcaccatc
gaggacgtgatcgagccctatctgatccagcagggctttttgcagcgcacgccgcgcggg
cgcatggcgacccaggcggcgtaccgccacctgggccttcccgtgccgggcgacgacgcc
agctga

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