Delftia acidovorans: Daci_2155
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Entry
Daci_2155 CDS
T00620
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dac
Delftia acidovorans
Pathway
dac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Daci_2155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dac03019
]
Daci_2155
Enzymes [BR:
dac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Daci_2155
Messenger RNA biogenesis [BR:
dac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Daci_2155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABX34795
UniProt:
A9BVD1
LinkDB
All DBs
Position
2368175..2369689
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AA seq
504 aa
AA seq
DB search
MTSSFSNLQLAESLARAVADMGYESMTPIQAQAIPVVLTGKDVMGAAQTGTGKTAAFSLP
LLQRLMRHENTSASPARHPVRALVLLPTRELADQVAQQIAQYAKYTKLRSTVVFGGMDMK
PQTLELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSH
LPKTRTTLLFSATFSPEIKRLASSYLQDPVTIEVARPNETASTVEQRFYSVSDDDKRYAL
RSLLKQRDIRQAFVFSNSKLGCARLTRALERDGLRATALHGDKSQDERLKALEAFKRGEV
DLLVCTDVAARGLDIKDVPAVFNYDVPFNAEDYVHRIGRTGRAGASGIAVTLVTNHDARL
VGEIEKLIKKKINVEPCPMEDFRGSAPRGHRFDELPRQSSGGYGRERDRGAERGDRGGDA
SRGSSGFGHRGSRMTQRPAHSDPFFDKPYEASASVDASWDSQGAAAPKAGSGIKPKRKLA
ALFKAPVAPVAPVPPVAPVATSEV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgacaagctctttctccaatctccagctggctgagtccctggcgcgcgccgtggccgac
atgggctacgagtccatgacgcccatccaggcacaggccattccggtcgttctgaccggc
aaggatgtcatgggcgccgcccagaccggcacaggcaagacggcggcgttctcgctgccg
ttgctgcagcggctgatgcgccacgaaaatacctccgcttcgcctgcacgccaccccgtg
cgggcgttggtgcttttgcccacacgcgaactggcggaccaggtggcccagcagatcgcc
cagtatgcgaagtacaccaagctgcgcagcaccgtggtgttcggcggcatggacatgaag
ccgcagacgctggagctcaagaagggcgtcgaggtgctggtggccacgccgggccgtctg
cttgaccacatcgaagccaagaacgccgtgctcaaccaggtcgagtacgtggtgcttgac
gaggcagaccgcatgctggacatcggctttctgcccgatctgcagcgcatactgtcccat
cttcccaagacacgcaccaccttgctgttcagcgccaccttctcgcccgagatcaagcgc
ctggccagcagctacctgcaggaccccgtcaccatcgaagtggcgcgccccaacgagacg
gcgtccacggtggagcagcgcttctacagcgtcagcgacgacgacaagcgctatgcgctg
cgctccctgctcaagcagcgcgacatccgccaggccttcgtcttctccaacagcaagctg
ggctgtgcgcgcctgacgcgcgccctggagcgtgatggcctgcgcgcaacggcgctgcac
ggcgacaagagccaggacgagcgcctgaaggcgcttgaagccttcaagcgcggcgaggtg
gatctgctggtgtgtaccgatgtcgcggcccgtggcctggacatcaaggacgtgccggcc
gtcttcaactacgacgtgcccttcaacgccgaagactatgtgcaccgcatcggccgcacg
ggccgtgcaggcgcctccggcattgccgtgaccctggtgaccaaccacgatgcgcgcctg
gtgggcgagatcgagaagctcatcaagaagaagatcaacgttgagccctgccccatggaa
gatttccgtggcagcgcaccgcgtggtcaccgttttgacgagctgccgcgccaaagcagc
ggcggctacggtcgtgaacgggatcgcggcgccgagcgtggcgatcgcggcggtgatgcg
tcgcggggcagttccggttttggccatcgcggctcgcgcatgacccagcgcccggcgcac
tcggacccgttcttcgacaagccctacgaggcatccgccagcgtcgatgcgagctgggac
agccagggtgctgccgcgcccaaggcgggcagcggcatcaagcccaagcgcaagctggcc
gcgctgttcaaggcgcctgttgcacctgtcgcgccggtcccgcctgtggcacccgtcgcc
acttccgaggtctga
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integrated database retrieval system
