Delftia acidovorans: Daci_2188
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Entry
Daci_2188 CDS
T00620
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dac
Delftia acidovorans
Pathway
dac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Daci_2188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dac03019
]
Daci_2188
Enzymes [BR:
dac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Daci_2188
Messenger RNA biogenesis [BR:
dac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Daci_2188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Slu7
Motif
Other DBs
NCBI-ProteinID:
ABX34828
UniProt:
A9BYT3
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All DBs
Position
2401180..2402769
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AA seq
529 aa
AA seq
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MIKNIIDKLLGKTSAAPRARKSPFGKRQEVPVQVHGIDPNLVDRRAIDVVETLQDAGYEA
YIVGGAVRDLLLGLRPKDFDVATNATPEQVKGLFRRAFIIGKRFRIVHVVYGRGRENEVI
EVSTFRAFLDNSAAEAVSGNERTSKAQLAGMHHAVDASGRVLRDNVWGPQDQDATRRDFT
INAMYYDPRTQIVVDYHKGIDDAKKRMLRMIGDPATRYREDPVRIIRAVRFAAKLAGKGF
KIEPKTAKPLVECEPLLADVPQSRLFDEMLKLLQTGHALASVEQLRGLGLARGIYSLLDV
VVERAEQPFVRAALTDTDRRVEEGKPVAPSFLLACVLWHDVKTGWERRLNQRQHPFPALQ
ESIDEVFDQRIGDVSGRGKLAADMREIWVMQPRFDKRTGATPFSLVAQPRFRAGFDFMRL
RADIGEVDESLASWWQEFQNADDARRDDLIAQARDEQRARQRSAEPKVHRVAKARPARED
AGAGEAQQADAPAAALPQVEGEEGSAPKKRRRRRRKPQGGGDGAVGGDD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaacatcatcgacaagctgctgggcaagacctcggctgccccccgcgcccgc
aagtcccccttcggcaagcgccaggaagtgcccgtgcaggtgcacggcatcgaccccaac
ctggtggaccggcgtgccatcgacgtggtcgagacgctgcaggacgccggctacgaggcc
tacatcgtcggcggcgccgtgcgcgacctgctgctgggcctgcgccccaaggacttcgac
gtggccaccaatgccacgcccgagcaggtcaagggcctgttccgccgcgccttcatcatc
ggcaagcgctttcgcatcgtgcacgtggtctatggccgcgggcgcgagaacgaggtcatc
gaagtctccaccttccgcgccttcctggacaacagcgcggccgaggccgtgagcggcaac
gagcgcaccagcaaggcccagctcgccggcatgcaccatgcggtggacgccagcggccgc
gtgctgcgcgacaacgtctggggcccgcaggaccaggacgccacgcgccgcgacttcacc
atcaacgccatgtactacgacccgcgcacgcagatcgtggtggactatcacaagggcatc
gacgacgccaagaagcgcatgctgcgcatgatcggcgacccggccacgcgctaccgcgaa
gacccggtgcgcatcatccgcgccgtgcgcttcgcggccaagctggcgggcaagggcttc
aagatcgagcccaagaccgccaagcccctggtggagtgcgagccgctgctggccgatgtg
ccgcaaagccgcctgttcgatgaaatgctcaagctgctgcagaccggccacgcgctggcc
tcggtggagcagttgcgcggcctgggcctggcacgcggcatctactcgctgctggatgtg
gtggtcgagcgcgcggagcagccctttgtgcgcgccgcgctgaccgacaccgaccgccgt
gtcgaggaaggcaagcccgtggcgcccagcttcctgctggcctgcgtgctgtggcatgac
gtcaagaccggctgggaacgccgcctgaaccagcgccagcaccccttccccgcgctgcag
gaatccatcgacgaagtgttcgaccagcgcatcggcgatgtctcgggccgcggcaagctg
gccgccgacatgcgcgagatctgggtcatgcagccgcgctttgacaagcgcacgggcgcc
acgccgttcagcctggtggcccagccgcgctttcgcgcgggcttcgacttcatgcgcctg
cgcgccgacatcggcgaggtcgatgaaagcctggccagctggtggcaggagttccagaac
gccgacgacgcgcgccgcgacgacctgatcgcccaggcccgcgacgagcagcgcgcccgc
cagcgcagcgccgagcccaaggtgcaccgcgtggccaaggcccgccctgcgcgcgaggac
gccggcgctggcgaagcgcagcaggccgacgcacctgccgccgccttgccccaggtggag
ggtgaggaagggtcagcgcccaagaagcgccgccgccgtcgccgcaagccccagggcggt
ggtgatggcgccgtgggcggggatgactga
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