Delftia acidovorans: Daci_2902
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Entry
Daci_2902 CDS
T00620
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dac
Delftia acidovorans
Pathway
dac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Daci_2902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dac03019
]
Daci_2902
Enzymes [BR:
dac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Daci_2902
Messenger RNA biogenesis [BR:
dac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Daci_2902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
UvrD-helicase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABX35540
UniProt:
A9BZE0
LinkDB
All DBs
Position
complement(3184757..3186553)
Genome browser
AA seq
598 aa
AA seq
DB search
MTFEELNLAPAILKAVLEEGYENPTPIQAQAIPAVLAGHDLLAGAQTGTGKTAAFTLPML
QRLSQGQVPRNKFGGKGIRALVLTPTRELAAQVEESVRSYAKYLDINSTVIFGGVGMKPQ
IDRIKKGVDILVATPGRLLDLQQQGFMDLSTVEVLVLDEADRMLDMGFIHDVKKVLALVP
KDKQSLLFSATFSDEIRDLANGLLRNPQSIQVTPSNTTVQRITQVIHPVGRGKKKQVLLH
IINENNWSQVLVFTRTKFGANNVAEFLTKNNISAMALHGNKSQSARTQALAGFKTGELRA
LVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGREGHAVSLVCMDEEGFMM
DIERFTKQEIPVQVLEGFGPEEGEVAEPIAMGRQTIWGGAGKPPSRDVMQAAAKAARQEM
MDRIRTTKATQPDRGGRAGGRGQAPKAGSDEGRSEGNAGGQGRGRNHAGASANNKPRRDR
FDGPGNGSGAAHRPKAAPQNAPRRGPRPDGEGGGGVRRFDDQPPRADAHLGTQLGHARSS
GPRGSAGGGQPDPMRTSVDTMAERGRRGGFNRGGNGGGGGGGFGGGGRGGPSRGGYGR
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaagaactgaatctggctcccgccattctgaaggccgtgcttgaggagggt
tacgagaacccgactcccatccaggcacaggccatccctgcggtgctcgccggccacgac
ctgctggcaggtgcccagaccggcaccggcaagaccgctgccttcaccctgcccatgctg
caacgcctctcgcaaggccaggtgccgcgcaacaagttcggcggcaagggcatccgcgcc
ctggtgctgacgcccacgcgtgaactcgccgcacaggtcgaggaatcggtgcgcagctac
gccaagtacctggacatcaactccaccgtcatcttcggcggcgtgggcatgaagccccag
atcgaccgcatcaagaagggcgtggacatcctggtcgccacgccgggccgcctgctggat
ctgcagcagcaaggcttcatggacctgtccaccgtcgaagtcctggtgctcgacgaagcc
gaccgcatgctggacatgggcttcatccatgacgtcaagaaggtgctggccctggtgccc
aaggacaagcaaagcctgctgttctcggccaccttcagcgacgagatccgcgacctggcc
aacggtctgctgcgcaacccgcagtccatccaggtcacgcccagcaacaccacggtccag
cgcatcacccaggtgatccaccccgtgggccgcggcaagaaaaagcaagtgctgctgcac
atcatcaacgagaacaactggagccaggttctggtgttcacgcgcaccaagttcggcgcc
aacaacgttgccgaattcctgaccaagaacaacatcagcgccatggcgctgcacggcaac
aagagccagagcgcccgcacccaggccctggccggcttcaagaccggcgagctgcgcgcc
ctggtcgccaccgacatcgctgcacgcggcatcgatatcgatgagctgccgcacgtcgtg
aactacgagatccccaacgtgtccgaggactacgtgcaccgcatcggccgcacgggccgt
gccggtcgcgaaggccacgccgtcagcctggtctgcatggacgaggaaggcttcatgatg
gacatcgagcgcttcaccaagcaggaaatccctgtgcaggtgctcgaaggcttcggcccg
gaagaaggcgaagtggccgaacccatcgccatgggccgccagaccatctggggcggcgcg
ggcaagccgcccagccgtgacgtcatgcaggccgccgccaaggctgcgcgccaggaaatg
atggaccgcatccgcaccaccaaggccacccagcccgaccgtggcggccgcgcaggcggc
cgtggtcaggctcccaaggccggctcggacgaaggccgctccgaaggcaacgccggcggc
cagggccgtggccgcaaccacgccggtgcaagcgccaacaacaagccgcgccgcgatcgc
ttcgatggcccgggcaatggctccggcgccgcccaccgccccaaggcagccccccagaac
gcccccaggcgcggcccgcgccctgacggcgaaggcggcggcggtgtccgtcgcttcgat
gaccaacccccgcgcgctgatgcccacctgggcacgcagctgggccatgcacgcagcagc
ggcccccgtggcagcgcaggtggcggccagcccgatccgatgcgcaccagcgtggacacc
atggccgaacgcggccgccgtggcggcttcaaccgcggcggcaatggtggcggtggaggc
ggcggcttcggcggcggtggccgtggcggcccctcgcgcggcggctacggtcgctga
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