Delftia acidovorans: Daci_4001
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Entry
Daci_4001 CDS
T00620
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dac
Delftia acidovorans
Pathway
dac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Daci_4001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dac03400
]
Daci_4001
DNA repair and recombination proteins [BR:
dac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Daci_4001
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Daci_4001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
AAA_16
Kinesin
Microtub_bd
Pyr_redox
AAA_25
KdpC
Motif
Other DBs
NCBI-ProteinID:
ABX36632
UniProt:
A9C066
LinkDB
All DBs
Position
complement(4404384..4406522)
Genome browser
AA seq
712 aa
AA seq
DB search
MNSSDLAGRYSLLRTHVMHEVSDSSPAPEASGQFVHFADSPFELFQPYPPAGDQPAAIEK
LVEGIQDGESFQTLLGVTGSGKTFTMANVIARLGRPAIVFAPNKTLAAQLYSEFREFFPK
NSVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEHIEQMRLSCTKSLMERRDVVIVATVS
AIYGIGEPESYHRMIMTLRTGDRINQRDVIAQLIRMQYQRNDQDFSRGKFRVRGDTIDVF
PAEHSELAIRIELFDDEVESLQLFDPLTGRVRQSIPRFTVYPSSHYVTPRDKVLAAVETI
KLELAERLKQLVGDGKLVEAQRLEQRTRFDLEMLTEVGHCKGIENYTRHLSGAAPGEPPS
TLTDYLPGDALMFLDESHQMIGQLNAMYSGDRSRKTTLVEYGFRLPSALDNRPLKFEEFE
QRMRQVIFVSATPADYEKTHSGQVVDQVVRPTGLIDPEIEVRPATNQVDDVLQEIRLRVE
RTERVLITTLTKRMAEQLTDYLSENGVKVRYLHSDVETVERVEIIRDLRLGVFDVLVGIN
LLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAARNLHGKAILYADRVTESMKKA
IGETERRRAKQISFNEENGIEPKQIVKRVKDLIDGVYSEKSGKEAERLQANQLERARVED
MSEKDVAKEIKRLEKQMLEHARSLEFEQAARVRDQLALLKEQLFGGSSVQVS
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaattctagcgatctcgccggccgatactcacttttgcgaacccacgtcatgcacgaa
gtctctgattcctctccagcacctgaggcctccggccagttcgtgcatttcgcggactcc
cccttcgagctgttccagccctatccgccggccggcgatcagcccgcagccattgaaaag
ctggtcgaaggcatccaggacggcgaatccttccagaccttgctgggcgtgacgggctcg
ggcaagaccttcaccatggccaacgtgatcgcccgcctgggccgcccggccattgtcttc
gcgcccaacaagacgctggcagcgcagctgtacagcgaattccgcgagttctttcccaag
aactccgtcgaatacttcgtcagctactacgactactaccagcccgaggcctatgtgccc
cagcgcgacctgttcatcgaaaaggacagcgccatcaacgagcacatcgagcagatgcgg
ctgtcgtgcaccaaaagcctgatggagcggcgcgacgtggtcatcgtcgccacggtctcg
gccatctacggcatcggcgagcccgaaagctaccaccgcatgatcatgacgctgcgcacc
ggcgaccgcatcaaccagcgcgacgtcatcgcgcaactgatccgcatgcagtaccagcgc
aacgaccaggacttcagccggggcaagttccgcgtgcgcggcgacaccatcgacgtcttc
cccgccgagcattccgagctggccatccgcatcgaactgttcgacgacgaggtcgaaagc
ctgcaattgttcgacccgctcacgggccgcgtgcgccagagcattccgcgcttcaccgtc
taccccagcagccactacgtcacgccgcgcgacaaggtcctggccgccgtggaaaccatc
aagctggagctggccgagcggctcaagcaactggtgggagacggcaagctggtcgaggcc
cagcgcctggagcagcgtacgcgcttcgatctggagatgctcaccgaggtcggtcactgc
aagggcatcgagaactacacccgccacctctcaggcgccgcacccggcgagccgcccagc
accctgaccgactacctgcccggcgacgccctcatgttcctggacgagagtcaccagatg
atcggccagctcaacgccatgtacagcggcgaccgctcgcgcaagaccacgctggtggaa
tacggcttccggttgccttcggcgctggacaaccggccgctcaaattcgaggaattcgag
cagcgcatgcgccaggtcatctttgtctccgccacgccggcagactacgagaagacccac
tcgggccaggtcgtggaccaggtcgttcgccccacaggcctcatcgatcctgaaatcgaa
gtacgcccggccaccaatcaggtggacgacgtgctgcaggaaatccgcctgcgcgtcgaa
cgcacggagcgtgttctcatcaccacgctgaccaagcgcatggccgagcaactcactgac
tacctgagtgaaaacggcgtcaaggtgcgctatctgcactccgacgtggaaacggtggag
cgtgtggagatcattcgtgacctgcgcctgggtgtctttgacgtgctcgtgggcatcaac
ctgctgcgcgaggggctggacatccccgaagtctcgctggtcgccatcctcgatgccgac
aaggaaggctttcttcgcgccgaacgcagtctcatccagaccatcggccgcgccgcacgc
aacctgcatggcaaggccatcctctatgcggaccgtgtcacggagtccatgaagaaggcc
attggcgagaccgagcgccgccgtgccaagcaaataagcttcaacgaggaaaacggaatc
gaacccaagcagattgtcaagcgggtgaaagacctgattgatggtgtctacagcgaaaaa
agtggcaaggaagcggaacgcctgcaggccaatcagctcgaaagagcgcgtgtcgaggac
atgtccgaaaaagatgtggccaaggaaatcaagcgtctggagaagcagatgctcgaacat
gcgcgcagcctggagttcgaacaggctgcgcgggtgcgcgatcagttggcgctgctcaag
gagcaactgttcggaggctcatccgtgcaggtttcctga
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integrated database retrieval system
