Delftia acidovorans: Daci_4348
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Entry
Daci_4348 CDS
T00620
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
dac
Delftia acidovorans
Pathway
dac02020
Two-component system
dac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Daci_4348
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Daci_4348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dac03021
]
Daci_4348
Transcription machinery [BR:
dac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Daci_4348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
HTH_3
HTH_23
HTH_38
HTH_IclR
CENP-B_N
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
ABX36979
UniProt:
A9BWZ4
LinkDB
All DBs
Position
4760996..4762558
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AA seq
520 aa
AA seq
DB search
MGSMHLRADIRQSQTLSPRLQLAVRMLQMSSLDFAAVVRSKLEDNPFLEDPQDAQYGEYE
QGLLDGKELGEEGREGGMGRLAPEAGLAPDTGMDDGIGMGIGMDMDRDLPGMQHPPDPAD
HLPGPATEPADDRDLWLADMHTGARQGVDGEGTAMDLAACETTLAMHLHGQLNVMAMTPR
DLCMARAIVESLDDDGYLRTDLQELAGLLALSPAPDAQEMLIALRLVQSLDPAGVAARSV
GECLLLQCPQIGDARLRQLAQAMVQDHMDALAARDVPRLARALQVPPAQITQALDCIRRL
NPRPGWNFGSSHVDYIVPDVIVRRGQNGWNVHLNPAVVPRVRLNRVYEQLFQRHRRSGQN
QLADHLQDARWTVRNVEQRFSTILDVAQAIVRKQQLFLEFGAMAMKPLVLREIAEEVGVH
ESTVSRVTNNKYMATPTGVFELKHFFSRPMLSASGNACSATAIRELIGDIIAAESDARPL
SDVEIARQLSAQGLVVARRTVTKYRQLLRIEPADRRRRHA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggttccatgcacctcagggcggacatacgccagtcccagacgctttctccccgcctg
cagcttgcggtgcggatgctgcagatgtcctcgctggactttgccgccgtggtgcgcagc
aagctggaggacaacccgttcctggaagacccgcaggatgcgcagtacggcgagtacgaa
caggggctgctcgacggcaaggagctgggtgaagagggccgggaaggcggcatgggcagg
ctggccccggaggcaggcctggccccggacaccggcatggatgacggcatcggcatgggc
atcggtatggacatggaccgcgacctccccggcatgcagcacccgcccgacccggccgac
cacctgcccggccccgccaccgaacccgccgacgaccgcgacctgtggctggccgacatg
catacgggcgcgcgccagggggtggatggagaaggcacggccatggatctggccgcctgc
gagaccacgctggccatgcacctgcacggccagctcaatgtgatggcgatgacgccacgc
gacctgtgcatggcccgggccatcgtggagtcgctggacgacgacggctatctgcgcacc
gacctgcaggagctggccggcctgctggccctcagccccgcacctgacgcgcaggaaatg
ctcattgccctgcgcctggtgcaatcgctggacccggccggcgtggccgcccgcagcgtg
ggcgaatgcctgttgctgcaatgcccgcagatcggcgatgcccgcctgcgccagctggcc
caggccatggtgcaggaccacatggatgcgctggccgcccgcgacgtgccccggctggcc
cgggcgctgcaggtgccgcccgcgcagatcacgcaggcgctggactgcatacgtcggctg
aaccccaggccgggctggaacttcggctcctcccacgtggactacatcgttcccgacgtg
atcgtgcgccggggccagaacggctggaacgtgcacctcaaccccgcggtcgtgccgcgc
gtgcgcctgaaccgcgtctacgagcaactgtttcagcgccaccgccgcagcggccagaac
caactggccgaccacctgcaggatgcgcgctggacggtgcgcaacgtggagcagcgcttt
tccaccatcctcgacgtggcgcaggccatcgtgcgcaagcagcagctgttcctggagttc
ggcgccatggccatgaagccgctggtgctgcgcgagattgccgaggaagtgggcgtgcac
gagtccaccgtctcgcgcgtgaccaacaacaaatacatggccacgcccacgggcgttttc
gagctcaagcatttcttctcgcgccccatgctcagcgccagcggcaatgcctgctcggcc
acggccatccgcgagctgatcggcgacatcatcgcggccgagtccgatgcccggccgctg
tcggatgtcgaaatcgcacgccagctgagtgcccagggcctggtcgtggcgcgccgcacc
gtcaccaaataccgccagctgctgcgcatagaaccggccgaccggcgcaggcgccacgcc
tga
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