Delftia acidovorans: Daci_4629
Help
Entry
Daci_4629 CDS
T00620
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dac
Delftia acidovorans
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dac03009
]
Daci_4629
Enzymes [BR:
dac01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Daci_4629
Ribosome biogenesis [BR:
dac03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Daci_4629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_31
Methyltransf_25
Methyltransf_23
MTS
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ABX37258
UniProt:
A9C3E7
LinkDB
All DBs
Position
complement(5087410..5088882)
Genome browser
AA seq
490 aa
AA seq
DB search
MSEPRDNKIPDNLPEADIDAPALPEGWLQVLSMDMDAQGVARKSDGKVVFIDGALPTELV
SANTHRKKNNWEAASLTAIHRESSQRVRPGCPNFGLHAGACGGCKMQHLHVGAQVAIKQR
VLEDNLWHLAKVKPETLLRPIEGPSWAYRFRSRLSVRYVAKKGKVLVGFHERKSRYIADM
ETCKILPPHVDAMLLPMRALIASMDARETCPQIEVACGDSVTALVLRHLEPLSENDQARL
RAFAVEHNVQWWLQPKGPDTVHLMEQGGAQLDYGLPDFGITMPFKPTDFTQVNPHINRVL
VTRALRLLDVKKDERVIDWFCGLGNFTLPLATQAREVLGIEGSDTLVKRSHENYAANNAQ
RAEGDKLAPTRFVARNLFEMTPEMLFADGVAGKWLVDPPREGAFALSKALADIHQARIGA
EGAEPLPAGHEAWRFPERIVYVSCNPATLARDAGLLVHLAGYRCVSAGVVNMFPHTAHVE
SMAVFERCAD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaccccgcgacaacaagatccccgacaacctgcccgaagccgacatcgacgcc
cctgcactgcccgaaggctggctgcaggtgttgtccatggatatggacgcccagggcgtg
gcccgcaagagcgatggcaaggtggtattcatcgacggcgccctgcctaccgaactggtc
agcgccaacacccatcgcaagaaaaacaactgggaagccgccagcctgacggccatccac
cgcgaatcttcccagcgcgtgcgccccggctgcccgaatttcggtctgcacgccggtgcc
tgcggcggctgcaagatgcagcatctgcacgtgggcgcccaggtggccatcaagcagcgc
gtgctggaagacaatctctggcatctggccaaggtcaagcccgagacgctgctgcgcccc
atcgaaggtccgtcctgggcctaccgtttccgctcgcgcctttcggtgcgctatgtggcc
aagaagggcaaggtgctggtgggctttcacgagcgcaagagccgctacatcgccgacatg
gagacctgcaagatcctgccgccccatgtggacgccatgctgctgcccatgcgcgcgctg
atcgcctccatggatgcgcgcgaaacctgcccgcagatcgaggttgcctgcggcgattcc
gtcacggccctggtgctgcgccatctggagccgctgtccgagaacgaccaggcccgtctg
cgcgctttcgcagtcgagcacaacgtgcagtggtggctgcagcccaagggcccggacacc
gtgcacctcatggagcagggaggcgcccagctcgactacggcctgcccgatttcggcatc
accatgccgttcaagcccacggacttcacccaggtcaatccgcacatcaaccgcgtgctg
gtcacgcgcgcgctgcgcctgctggatgtcaagaaggacgagcgcgtgatcgactggttc
tgcggtctgggcaacttcacccttcccctggccacgcaggcgcgcgaggtgctgggcatc
gagggcagcgataccctggtcaagcgctcccatgaaaactacgcggccaacaacgcacag
cgcgcagagggcgacaagctcgcgcccacgcgctttgtggcgcgcaacctgttcgagatg
acgcccgagatgctgttcgccgacggcgtggccggcaagtggctggtcgatccgccgcgc
gaaggcgcgtttgcgctgtccaaggccctggccgacatccaccaggcgcgcatcggtgcc
gaaggcgccgagcccctgccggcagggcatgaggcctggcgctttcccgagcgcatcgtc
tatgtcagctgcaatcccgccacgctggcgcgcgatgccggccttctggtgcatctggcc
ggctatcgctgtgtgtcggcaggcgtggtcaacatgttcccccacacggcccacgtggag
agcatggcggtgttcgagcgctgcgcagactga
DBGET
integrated database retrieval system
