Delftia acidovorans: Daci_5331
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Entry
Daci_5331 CDS
T00620
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dac
Delftia acidovorans
Pathway
dac03420
Nucleotide excision repair
dac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Daci_5331
03430 Mismatch repair
Daci_5331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dac03400
]
Daci_5331
Enzymes [BR:
dac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Daci_5331
DNA repair and recombination proteins [BR:
dac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Daci_5331
MMR (mismatch excision repair)
Other MMR factors
Daci_5331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABX37960
UniProt:
A9BNR5
LinkDB
All DBs
Position
complement(5913955..5916423)
Genome browser
AA seq
822 aa
AA seq
DB search
MFPIDLLDGASGAAPASNSPLLANLNEEQLAAVTLPAGHALILAGAGSGKTRVLTTRIAW
LLQTGQATPGSILAVTFTNKAAKEMLARLSAMLPYNVRGMWIGTFHGLCNRLLRAHHQAA
KLSSTFQILDTQDQLSAVKRLCKQFNVDDERFPPKQLQYFIAGCKEEGMRPGDVVANDPD
TRKKVEIYQLYEEQCQRESVVDFGELMLRSYELLRDDAALRAHYQRRFRHIMVDEFQDTN
KLQYQWLKQLAGDMVDGRLQATGSVIAVGDDDQSIYAFRGARVGNMQDFVREFDVRQQIK
LEQNYRSYSNILDCANALISHNSQRLGKNLRTTQGPGEPVRIYEAPTDMAEAQWMVEEIQ
QLVKKDGWQRQEIAVLYRSNAQSRVIESQLFNAAIPYRVYGGLRFFERAEIKHALAYLRL
LENPHDDTSFLRVVNFPPRGIGARSVETLQDAARSAGCSLHDAVSAVPGAPGTKLAGFVA
KIDVLREQTQGRTLREIIEAIEEESGLLEHYRNEKEGADRIENLQELVNAAESFVTQEGF
GRDAVALPLDEHDGARALTQSPASQGLDPALPLLDTPLTPPAGTVAGMVDADTGETLSPL
AAFLTHAALEAGDNQAQAGQDAVQLMTVHASKGLEFDAVFIGGVEEGLFPHENAMMDRGG
LEEERRLAYVAITRARKRLYLSHSQTRMLHGQTRYNVKSRFFDELPDEALKWITPKQGGF
GSYAPRPGGGGGGSYGSRDRGGFGNKAEGWRSEVFASPPVPPQKAAPGHGLRVGLNVFHN
KFGEGKVLALEGTGDDARAQVSFGRHGTKWLALSIAKLTVVE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgttcccgatcgatctgctcgacggcgcctccggtgccgcacccgcctccaactcccct
ttgctggccaacctcaacgaagagcagcttgctgccgtcacgcttccggccggccacgcg
ctgatcctggcaggtgcgggctcgggcaagacgcgggtgctgaccacgcgcatcgcctgg
ctgctgcagacgggccaggccacgccgggctccatcctggccgtgaccttcaccaacaag
gcggccaaggaaatgctggcccgcctgtcggccatgctgccctacaacgtgcgcggcatg
tggatcggcaccttccacggcctgtgcaaccggctgctgcgcgcccaccaccaggcggca
aagctgtcgtccaccttccagatcctggacacgcaggaccagctgtcggccgtcaagcgc
ctgtgcaagcagttcaacgtggacgacgagcgcttcccgcccaagcagctgcagtacttc
attgccggctgcaaggaagagggcatgcgccccggcgacgtggtggccaatgacccggac
acgcgcaagaaggtcgagatctaccagctctacgaggagcagtgccagcgcgagagcgtg
gtcgatttcggcgagctgatgctgcgctcctacgagctgctgcgcgacgatgccgcgctg
cgcgcccactaccagcggcgctttcgccacatcatggtcgacgagttccaggacaccaac
aagctgcagtaccagtggctcaagcagctggcgggcgacatggtggatggccgcctgcag
gccacgggcagcgtgatcgccgtgggcgacgacgaccagagcatctacgcctttcgcggt
gcgcgcgtgggcaacatgcaggacttcgtgcgcgagttcgacgtgcgccagcagatcaag
ctggagcagaactaccgctcctacagcaacatcctggactgcgccaacgcgctcatcagc
cacaacagccagcgcctgggcaagaacctgcgcaccacccagggcccgggcgagcccgtg
cgcatctacgaggcgcccacggacatggccgaggcgcagtggatggtcgaggaaatccag
cagctcgtgaaaaaggacggctggcagcgccaggaaatcgccgtgctctaccgcagcaat
gcgcaaagccgggtgatcgagtcgcagctgttcaatgccgccattccctaccgcgtgtac
ggcgggctgcgctttttcgagcgcgccgaaatcaagcatgcgctggcctacctgcgcctg
ctggagaacccgcacgacgacaccagctttctgcgcgtggtgaacttcccgccgcgcggc
atcggcgcgcgcagcgtggagacgctgcaggacgcggcgcgcagcgcgggctgctcgctg
cacgatgccgtctcggcggtgccgggcgcgccgggcaccaagctcgcaggctttgtcgcc
aagatcgacgtgctgcgcgagcagacccagggccgcacgctgcgcgagatcatcgaggcc
atcgaggaagaaagcggcctgctcgagcactaccgcaacgaaaaggaaggcgccgaccgc
atcgagaacctgcaggaactcgtgaacgcggccgagagctttgtcacccaggaaggcttt
ggccgcgacgccgtggccctgccgctggacgagcacgacggcgccagggcactgacgcaa
agccccgccagccagggcctggaccctgcgctgccgctgctggacacgccgctcacgccg
ccggccggcaccgtggccggcatggttgatgccgataccggcgagacactgtcgccgctg
gccgccttcctgacgcacgcggcgctggaggctggcgacaaccaggcccaggccggccag
gacgccgtgcaactgatgaccgtgcatgcctccaaggggctggagttcgacgccgtcttc
atcggcggcgtggaagagggcctgttcccgcatgagaacgccatgatggaccgcggcggc
ctggaggaagaacgccgcctggcctatgtggccatcacccgcgcgcgcaagcgcctgtac
ctgagccattcgcagacgcgcatgctgcacgggcagacgcgctacaacgtcaagagccgc
ttcttcgacgagctgcccgatgaggcgctcaagtggatcacccccaagcagggcggcttt
ggcagctacgcgccccgccccggtggcggcggtggtggcagctatggttcacgcgatcgc
ggcggcttcggcaacaaggccgaaggctggcgcagcgaggtcttcgccagcccgcccgtg
ccgccgcaaaaggctgctccgggccacggcctgcgcgtgggcctgaacgtgttccacaac
aagttcggcgaaggcaaggtgctggccctggaaggcacgggcgacgacgcgcgcgcccag
gtcagctttgggcgccacggcacgaagtggctggcgctgtccattgccaagctcacggtc
gtggagtga
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