Delftia acidovorans: Daci_5429
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Entry
Daci_5429 CDS
T00620
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dac
Delftia acidovorans
Pathway
dac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Daci_5429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dac03400
]
Daci_5429
Enzymes [BR:
dac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Daci_5429
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Daci_5429
DNA repair and recombination proteins [BR:
dac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Daci_5429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_IS1595
RNHCP
Motif
Other DBs
NCBI-ProteinID:
ABX38058
UniProt:
A9BP13
LinkDB
All DBs
Position
complement(6028386..6029216)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVEVTRRAFAAQIAGARIESVALGKPLRWPLGIAPELLAGRDVHGVRRRGKYLLM
ELSEGLLMLHLGMSGSLRFVAPHEAPLGPAGTHDHFDLQTSKGLLRLHDPRRFGAVMYVA
AESDPWARRLLDHLGMEPLDDSFSFETFRAGLKASRTPIKQLLLNGSVVVGVGNIYASEV
LFMARIAPTQPACEVGPRKVRRLFEEIRRVLALAVEQGGTTLRDFSAPDGMAGHFQLQAK
VYGREGLPCTHCGSPVQMLRQGQRSTYFCARCQKAG
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccagaagtagaagtcacgcggcgcgcttttgccgcgcagatcgccgga
gcgcgcattgaatccgtggccttgggcaagcccttgcgctggccgttgggcattgccccc
gagctgctggccgggcgcgatgtgcacggcgtgcgccggcgcggcaagtatctgctgatg
gagctgagcgagggcctgctgatgctgcacctgggcatgtcgggcagcctgcgtttcgtg
gccccccatgaagcaccgctggggccagcaggaacgcatgaccatttcgacctgcagacc
agcaagggcctgctgcggctgcatgatccgcggcgctttggtgcggtgatgtatgtggcg
gccgagagcgatccctgggcgcgcaggctgctggaccatctggggatggagccgctggat
gacagcttctcgttcgagaccttccgggccggcctgaaggccagccgcacgcccatcaag
caattgctgctgaacggcagcgtggtcgtgggcgtgggcaatatctatgcgtccgaggtg
ctgtttatggcgcgcatcgcgcccacgcagccggcctgcgaggtcgggccgcgcaaggtg
cgccggttgttcgaggagatccgccgcgtgctggccctggcggtggagcagggcggcacg
acgctgcgcgatttctccgcgcccgacggcatggctggccacttccagctgcaggccaag
gtctatggccgcgaaggcctgccctgcacgcattgcggctcgcccgtgcaaatgctgcgc
caggggcagcgcagcacctacttctgcgcgcggtgccagaaggcgggatga
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