Delftia acidovorans: Daci_5893
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Entry
Daci_5893 CDS
T00620
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dac
Delftia acidovorans
Pathway
dac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Daci_5893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dac03021
]
Daci_5893
Transcription machinery [BR:
dac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Daci_5893
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
HTH_23
Sigma70_ECF
GerE
HTH_11
HTH_Tnp_4
HTH_Tnp_ISL3
HTH_40
HTH_20
HTH_3
DUF1804
HTH_24
HTH_29
TnsD
Motif
Other DBs
NCBI-ProteinID:
ABX38521
UniProt:
A9C158
LinkDB
All DBs
Position
6551986..6552501
Genome browser
AA seq
171 aa
AA seq
DB search
MSSGEFALHNEVQSLYRDHHRWLRDWLRRKLGCSHHAADLAHDTFVRLLGRKERADPVDP
RAYLTTIAHGLVVDFHRRRALERAYLESLAALPEPQAPSPEARAIVLEALVAIDAMLDGM
KPAVRQAFILSQLEGLTYAQIAARLQVTVRTVNNYMLKALEHCYLIVADGA
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccggcgaattcgcgctgcacaacgaggtccagtcgctctatcgtgaccatcac
cgatggctgcgcgattggctgcgcagaaaactgggctgctcccaccatgccgccgacctg
gcccacgacaccttcgtgcgcctgctcggccgcaaggagcgggcggacccggtggacccc
cgcgcctacctgaccaccatcgcccacggcctggtggtggactttcaccggcgccgggcg
ctggagcgggcctatctggaatcactggccgccctgcccgagccgcaggcgccttcgccc
gaggcgcgggccatcgtgctggaggccctggtggccatcgacgccatgctcgacggcatg
aagcccgccgtgcgccaggccttcatcctctcgcagctcgaaggcctgacctatgcgcag
atcgccgcccggctgcaggtgaccgtgcgcaccgtcaacaactacatgctcaaggcgctg
gagcactgctacctcatcgtggcagacggcgcatga
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