Delftia acidovorans: Daci_5959
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Entry
Daci_5959 CDS
T00620
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dac
Delftia acidovorans
Pathway
dac03030
DNA replication
dac03430
Mismatch repair
dac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Daci_5959
03430 Mismatch repair
Daci_5959
03440 Homologous recombination
Daci_5959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dac03032
]
Daci_5959
03400 DNA repair and recombination proteins [BR:
dac03400
]
Daci_5959
Enzymes [BR:
dac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Daci_5959
DNA replication proteins [BR:
dac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Daci_5959
DNA repair and recombination proteins [BR:
dac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Daci_5959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ABX38587
UniProt:
A9C1C4
LinkDB
All DBs
Position
complement(6647278..6647916)
Genome browser
AA seq
212 aa
AA seq
DB search
MQRWVAGLRRNWQRRRLADPAYAFLFDAPPPGEWVALDCETTGLDVRCDQIISIGAVRIV
GERILSSERLELLVRPSRSVPGDSVRIHRLRERDLARGLAIEDALAQLLRFIGSRPLVGY
YLEFDVAMIERVLRPWLGTGLPNERIEVSALYYDHRFRQLLPWQQQAPEIDLRFATLMAN
LGLPQREAHDALNDAVMAALAFIKLRRLAGAT
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
ttgcagcgctgggtggcgggcctgcggcgcaactggcagcggcgcaggctggcggacccc
gcctatgcctttctcttcgatgcgccgccgcccggcgaatgggtggcgctggactgcgag
accacgggcctggatgtgcgctgcgaccagatcatctccatcggcgccgtgcgcatcgtg
ggcgagcgcatcctgtccagcgaacgcctggaactgctggtgcgcccctcgcgcagcgtg
cccggcgacagcgtgcgcatccaccgcctgcgcgagcgggacctggcccggggcctggcc
atcgaggacgcgctggcgcagctgctgcgcttcatcggcagccgcccgctggtcggctac
tacctggaattcgacgtggccatgatcgagcgcgtgctgcgcccctggctgggcacgggg
ctgcccaacgagcgcatcgaggtctcggccctgtactacgaccaccgcttccggcagctg
ctgccctggcagcagcaggcgcccgagatcgacctgcgctttgccacgctgatggccaac
ctgggcctgccgcagcgcgaggcccacgacgcgctcaacgacgccgtgatggcggcgctg
gccttcatcaagctgcgcaggctggccggcgcgacgtag
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