Delftia acidovorans: Daci_6055
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Entry
Daci_6055 CDS
T00620
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
dac
Delftia acidovorans
Brite
KEGG Orthology (KO) [BR:
dac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dac03016
]
Daci_6055
Transfer RNA biogenesis [BR:
dac03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Daci_6055
Prokaryotic type
Methyltransferases
Daci_6055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Arf
AIG1
Ras
RsgA_GTPase
GTP_EFTU
ABC_tran
MMR_HSR1_Xtn
AAA_25
Roc
AAA_29
AAA_28
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ABX38683
UniProt:
A9C1M0
LinkDB
All DBs
Position
complement(6762896..6764317)
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AA seq
473 aa
AA seq
DB search
MLPRHNDPIAAIATAPGRGAVGIVRVSGKGVAPLVRALCGRDLKPREATYLPFRDAQGGP
IDHGLALFFPAPHSYTGEDVLELQAHGGPVVLQLLLARCLEAAQDPREGHRSVLPGLRLA
QPGEFTERAFLNDKIDLAQAEAIADLIDASTEAAARSASRSLSGAFSEEIHGLRDALVHL
RMLVEATLDFPEEEIDFLQKADASGQLARLRGKLDQVLSRAHQGALLREGIKVVIAGQPN
AGKSSLLNALAGAELAIVTPIAGTTRDKVQQTIQIEGVPLHVIDTAGLRESSDEVERIGI
ARAWDEIAAADAVLFLHDLTRMGEHDYLAADAAIAETLAQKLPRQVPVIDVWNKTDRAEP
ARMQEHGGREGSVALSARTGDGLDALRRRLLDVAGWQSAPEGLYLARARHVEALQAVAAH
LQEAELQLAAQAAHLDLLAEELRLAQVSLNSITGEFSSDDLLGVIFSSFCIGK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctgccccgccacaacgaccccatcgccgccatcgccaccgccccggggcggggtgcc
gtgggcatcgtgcgtgtgtccggcaagggcgtggcgccgctggtgcgggcgctgtgcggg
cgcgacctcaagccgcgcgaggccacctatctgccgtttcgcgatgcccagggcggcccc
atcgaccacggcctggccctgttcttcccggcgccgcacagctacaccggcgaggatgtg
ctggagttgcaggcccacggcggccccgtcgttttgcaactgctgctggcgcgctgcctg
gaggctgcgcaagacccgcgcgaaggccatcgcagcgtgctgccgggcctgcgcctggcc
cagcccggtgaattcaccgagcgtgcctttctcaacgacaagatcgacctggcccaggcc
gaggccattgccgacctgatcgacgccagcaccgaggccgccgcgcgcagtgcgagccgt
tcgctgtcgggcgctttttccgaggaaatccatggcctgcgcgacgcgctggtgcacctg
cgcatgctggtcgaggccacgctggactttcccgaggaagagatcgacttcctgcaaaag
gccgatgccagcggccagctcgcgcggctgcgcggcaagctggaccaggtgctgtcgcgc
gcccaccagggtgcgctgttgcgcgaaggcatcaaggtcgtgatcgcgggccagcccaat
gcgggcaagagctcgctgctcaacgcgctggccggtgcggagctggccatcgtcacaccg
attgccggcaccacgcgcgacaaggtgcagcagaccatccagatcgaaggcgtgcccctg
catgtgatcgacacggcaggcctgcgcgagagcagcgacgaggtcgagcgcatcggcatc
gcgcgcgcctgggacgagatcgccgcggccgatgccgtgctcttcctgcacgacctcaca
cgcatgggcgagcacgactacctcgctgccgatgccgccattgccgaaaccctggcccag
aagctgccgcgccaggtgcccgtcatcgatgtatggaacaagaccgatcgcgcggaaccc
gcccggatgcaggagcatggcggccgtgaaggcagcgtggcactgtcggcacgcacgggc
gatggcctggatgcactgcgccggcgcctgctggacgtggccggctggcagtcggcccca
gaaggcctgtacctggcgcgcgcgcgccatgtggaggcactgcaggccgtggccgcccac
ctgcaggaggccgagctgcagctggcggcccaggccgcccacctggacttgctggccgag
gaactgcgcctggcccaggtctcgctgaactccatcaccggggaattcagctccgacgat
ctgctgggcgtgatcttttccagcttctgcatcggcaagtga
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