Dactylosporangium sp. AC04546: KZZ52_08190
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Entry
KZZ52_08190 CDS
T10220
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
dact Dactylosporangium sp. AC04546
Pathway
dact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KZZ52_08190 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dact03019
]
KZZ52_08190 (rny)
Messenger RNA biogenesis [BR:
dact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KZZ52_08190 (rny)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
Motif
Other DBs
NCBI-ProteinID:
WVK89514
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Position
1804283..1805977
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AA seq
564 aa
AA seq
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MRKLNVPAVQVAAPVDDPAFLAEKDRQEHSLASLRTAAEDATAAVDEARAAAAAARTEAA
AAKAEASAARSEARRILDGARAEADSLLERAHRQAEADAEQARATARKAGEREVNQLTAV
AKEQSQDAERRQRRLDERERLLAEEAERLAERDRRISGTETDLAEREGNAVRREGELAEG
EERHRAELERIAGLTADAARVEVVETIEAQAKREAALLVRDIENDARNTAEQRARHIVVD
AIQRVASEQTAESVVSVLHLPSDEMKGRIIGREGRNIRAFESTTGVNLIIDDTPEAVLLS
CFDPVRREIGRLTLEKLVLDGRIHPHRIEEVFEQAKHEVERLCLRAAEDALVEVGITDLH
PELMTLVGRLRYRTSYGQNVLKHLVETAHIAGIMASELRLDPALIKRCAFLHDIGKALTH
EVEGSHALIGADVARKYGESDEVVHAIEAHHNEVLPQTIEAVLTQASDACSGGRPGARRE
SLEAYVKRLERIEEIAGGKSGVDKVFAMQAGREIRVMVRPDDVDDIGAAVLARDVAKQIE
EELTYPGQIRVTVVRESRVTEIAR
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atccgcaagctcaacgttccggcggtccaggtggcggcgccggttgacgatccggccttc
ctcgccgagaaggaccggcaggagcactcgctcgccagcctgcggaccgcggctgaggac
gccaccgcggccgtcgacgaggcgcgggccgccgcggcggcggcgcggaccgaggctgcg
gccgccaaggccgaggccagtgcggctcgatcggaggcgcggcggatcctggacggggcc
cgggccgaggccgactcgctgctggagcgggcgcaccggcaggccgaggcggatgccgag
caggcccgggcgacggcgcgcaaggcgggggagcgcgaggtcaaccagctcaccgccgtg
gccaaggagcagtcccaggacgccgagcgccggcagcggcggctcgacgagcgggagcgg
ctgctggccgaggaggccgagcggctggcggagcgggaccggcgcatcagcggtaccgaa
acggatctcgcggaacgagagggcaacgcggtccggcgggagggcgagctcgcggagggc
gaggagcggcaccgggccgagctggagcggatcgcggggctcacggccgacgcggcgcgg
gtcgaggtggtcgagacgatcgaggcccaggccaagcgcgaggcggcgctgctggtgcgc
gacatcgagaacgacgcgcggaacaccgccgagcagcgggcccgccacattgtcgtcgac
gccatccagcgggtcgccagcgagcagaccgcggagagcgtcgtcagcgtgctgcacctg
cccagcgacgagatgaagggccggatcatcggccgtgaggggcgcaacatccgggcgttc
gagtcgacgaccggggtgaacctgatcatcgacgacacgcccgaggcggtgctgttgtcc
tgcttcgacccggtgcggcgggagatcgggcggctgacgctcgagaagctggtgctcgac
gggcggatccacccgcaccgcatcgaggaggtcttcgagcaggcgaagcacgaggtggag
cgcctctgcctgcgcgcggccgaggacgcgctggtcgaggtgggcatcaccgacctccac
ccggagctcatgacgctggtcgggcggctgcggtaccgcacaagttatggccagaacgtc
ctcaagcacctcgtggagacggcccacatcgccggcatcatggcctccgagctgcggctg
gaccccgcgctgatcaagcggtgcgcgttcctgcacgacatcggcaaggcgctcacccac
gaggtcgagggcagccacgccctcatcggcgccgacgtggcccgcaagtacggcgagtcg
gacgaggtcgtccacgcgatcgaggcgcaccacaacgaggtgctgccgcagaccatcgag
gcggtcctgacccaggccagcgacgcctgctccggcgggcggcccggggcgcgccgggag
agcctggaggcgtacgtcaagcgcctcgagcgcatcgaggagatcgccggcggcaagtcc
ggcgtcgacaaggtcttcgcgatgcaggccggccgcgagatccgggtcatggtccgcccc
gacgacgtggacgacatcggggcggccgtgctggcccgcgacgtggcgaagcagatcgag
gaggagctgacctaccccggccagatccgcgtcaccgtcgtgcgggagtcccgcgtcacg
gagatcgcccgctga
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