Dactylosporangium sp. AC04546: KZZ52_09085
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Entry
KZZ52_09085 CDS
T10220
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
dact Dactylosporangium sp. AC04546
Brite
Enzymes [BR:
dact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KZZ52_09085 (hrpA)
Messenger RNA biogenesis [BR:
dact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KZZ52_09085 (hrpA)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WVK85521
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Position
1997646..2001503
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AA seq
1285 aa
AA seq
DB search
MSEVQKAPTLSELRARLAGLMPQDQHRLRRRIDGAKKSRHAQAIAEAIRADVERAEQRVA
ARRAATPQVSYPEQLPVSQRKDDILAAIRDHQVVIVAGETGSGKTTQLPKICLELGRGVT
GQIGHTQPRRIAARTVAERVAEELGSELGQTVGFKVRFSDQSSDRTMVKVMTDGILLAEM
QQDRLLRQYDTLIIDEAHERSLNIDFILGYLKQLLPRRPDLKVVITSATIDPERFSRHFG
DAPIVEVSGRTYPVEVRYRPIESADEGEDEVDQFDAICNAVLELQAEGSGDVLVFLSGER
EIRDTADALARLDLPNTEILPLFARLSFAEQHRVFQSHTGRRIVLATNVAETSLTVPGIK
YVIDPGTARISRYSHRLKVQRLPIEPVSQASANQRKGRCGRTSDGICIRLYSEEDFLGRP
EFTDPEILRTNLASVILQMISLGLGDLGAFPFIDPPDRRNVTAGVQLLEELGALEGAQKL
TPLGRRLSQLPVDPRLARMVLEAERNGCVREVMVITAALSIQDPRERPADKQAQAQQLHA
RFADKDSDFVGYLNLWNYLQEKQQELSSNQFRKLCRAEFLNYLRVREWQDIYSQLRSVLR
TMDVTPNEEPAAPLQIHVSLLSGLLSHVGLKDVDKHEYLGARGARFAVFPGSALFRKTPR
WVMAAELVETTRLWARVCARIEPEWIEPLAQHLVKRNYSEPHWEKKAAAVMAMEKVTLYG
VPIVAQRKVNYGRIDPALSRELFIRHALVEGDWETTHAFFAENRRLLDEVEELENRARRR
DILVDDETLFDFYDKRIAEEVVSGRHFDSWWKKTRREQPDLLTFDPAMLVNQGADAVRQE
QYPDRWSSYSLTYQFEPGTEADGVTVHIGLPLLGRVDDAQFSWQVPGLREELVTALIKSL
PKALRRNFVPAPDTARDALAGMPPGEGHLLDALERELRRLTGVTVPREAWDLSRIPDHLK
MTYRIVDDAGKPLAESKSLDELRSRLAPKVEETVAEAAVDVTRAGITSWSFGELPRTLHR
TVAGHTLTVYPALVDEGTSVAVKAFDLPARQALEMWAGTRRLLLLTLPPAARFVQGRLSN
EAKLSLSRNPHRNAVDLLDDCAACAVDQLMTDAGGPAWDEKGFTALRDKVRADVVDLTLE
VVDSVRKILAAAYDVEQRLARTKNPLLLPALADMRQQLSRLVYRGFVTDTGWQRLPDLER
YLRGIERRLEKVPTDPARDRDRMLTVHEVQREYDQLVSSMTMTPQLREIRWMIEELRVGL
FAQALGTAYPVSDVRIYRAMDALPA
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggtacaaaaggcccccacgctcagtgagctccgcgcgcgtctggccgggctc
atgccgcaggaccagcaccggctccggcggcgcatcgacggggcgaagaagtctcggcac
gcgcaggcgatcgccgaggcgatccgcgccgacgtggagcgggccgagcagcgtgtcgcc
gcccggcgggccgcgacgccccaggtcagctaccccgagcagctgccggtcagccagcgc
aaggacgacatcctggccgcgatccgcgaccaccaggtcgtgatcgtcgccggcgagacc
ggctcgggcaagacgacccagctgccgaagatctgcctggagctgggccggggcgtgacc
ggacagatcgggcacacccagccgcgccggatcgccgcgcgcacggtggccgagcgggtc
gccgaggagctgggctccgagctggggcagaccgtcgggttcaaggtgcgcttctccgac
cagtcgagcgaccggaccatggtcaaggtcatgaccgacggcatcctgctcgccgagatg
cagcaggaccggctgctccggcagtacgacacgctgatcatcgacgaggcccacgagcgc
agcctcaacatcgacttcatcctgggctacctcaagcagctcctgccccgccgccccgac
ctcaaggtggtcatcacctcggccaccatcgacccggagcgcttctcccggcacttcggc
gacgccccgatcgtcgaggtgtccggccggacgtatccggtcgaggtgcggtaccggccg
atcgagtcggcggacgagggcgaggacgaggtcgaccagttcgacgcgatctgcaacgcg
gtgctcgagctgcaggccgaggggtcgggcgacgtcctggtcttcctcagcggcgagcgg
gagatccgcgacaccgccgacgcgctggctcgcctcgacctgccgaacaccgagatcctg
ccgctgttcgcgcgcctgtcgttcgccgagcagcatcgggtgttccagtcgcataccggc
cggcggatcgtgctcgcgaccaacgtggccgagacgtcgctgaccgtgccggggatcaag
tatgtgatcgatccgggtaccgcgcgcatctcccggtacagtcaccgcttgaaggtccag
cggctgccgatcgagccggtgtcgcaggcctcggccaaccagcgcaagggccgctgcggg
cgcacgtccgacggcatctgtatccggctctacagcgaggaggacttcctcggccggccg
gagttcaccgacccggagatcctgcgcaccaacctcgcctcggtcatcctccagatgatc
tcgctcggcctgggcgacctcggcgcgttcccgttcatcgacccgccggaccgccgcaac
gtcaccgccggcgtgcagctgctggaggagctcggcgcgctggagggtgcgcagaagctg
accccgctcggccgccggctgtcccagctgccggtcgacccgcggctggcccggatggtg
ctggaggccgaacgcaacggctgcgtgcgcgaggtgatggtgatcaccgcggcgctgtcg
atccaggacccgcgggagcgcccggccgacaagcaggcccaggcgcagcagctgcacgcc
cggttcgccgacaaggactcggacttcgtcgggtacctcaacctgtggaactacctccag
gagaagcagcaggagctgtccagcaaccagttccgcaagctgtgccgggccgagttcctc
aactacctgcgggtccgcgagtggcaggacatctacagccagctgcgctcggtgctgcgg
accatggacgtgacgcccaacgaggagccggccgcgccgctgcagatccacgtctcgctg
ctgtccggcctgctctcgcacgtcgggctcaaggacgtcgacaagcacgagtatctgggt
gcgcgcggcgcccgcttcgccgtcttccccggctcggccctgttccgcaagacgccgcgc
tgggtgatggccgccgagctggtcgagacgacccggctgtgggcccgggtgtgcgcccgc
atcgagcccgagtggatcgagccgctggcccagcacctggtgaagcgcaactacagcgag
ccgcactgggagaagaaggccgccgcggtcatggcgatggagaaggtgacgctgtacggc
gtgccgatcgtcgcccagcgcaaggtgaactacggccggatcgacccggcgctgtcccgc
gagctgttcatccgccacgcgctggtggagggcgactgggagaccacccacgcgttcttc
gccgagaaccgccggctgctcgacgaggtcgaggagctggagaaccgggcccgccgccgc
gacatcctggtcgacgacgagacgctgttcgacttctacgacaagcgcatcgccgaggag
gtcgtctccggccggcacttcgacagctggtggaagaagacccgccgcgagcagccggac
ctgctcacgttcgacccggcgatgctggtcaaccagggtgcggatgcggtacggcaggag
cagtacccggaccgctggagcagctactcgctgacgtaccagttcgaacccggcaccgag
gccgacggcgtgaccgtccacatcggcctgccgctgctcggccgggtggacgacgcccag
ttcagctggcaggtcccgggcctgcgtgaggaactggtgacggcgctcatcaagtcgctg
cccaaggcgctgcggcgcaacttcgtgcccgcccccgacaccgcccgcgacgccctggcc
gggatgccgccgggggaggggcacctgctcgacgccctggagcgcgagctgcgccggctg
accggggtgaccgtcccgcgggaggcgtgggacctgagccgcatccccgaccacctcaag
atgacgtaccggatcgtcgacgacgccggcaagccgctcgccgagagcaagagcctggac
gagctgcggtcccggctcgcgccgaaggtcgaggagacagtcgccgaggccgcggtcgac
gtcacccgggccggcatcacgtcctggagcttcggcgagctgccgcgcaccctgcaccgc
acggtcgccggccacacgctcaccgtctatccggcgctcgtcgacgagggcacgtcggtg
gcggtcaaagccttcgacctgccggcccgccaggcgctggagatgtgggccgggacgcgc
cgcctgctgctgctcacgctgccgccggcggcgcgcttcgtgcagggccgcctgtcgaac
gaggcgaagctgtcgctcagccgcaacccgcaccgcaacgccgtcgacctgctcgacgac
tgtgcggcctgcgcggtcgaccagctgatgaccgacgccgggggaccggcgtgggacgag
aagggcttcaccgccctgcgcgacaaggtccgggccgacgtggtcgacctgacgctcgag
gtggtggacagcgtccggaagatcctggccgccgcctacgacgtcgagcagcgcctcgcc
cgcacgaagaacccgctgctcctgccggcgctggccgacatgcggcagcagttgtcgcgt
ctggtgtaccgcggcttcgtcaccgacacgggatggcagcgcctgccggacctggagcgg
tatctgcgcggcatcgaacggcggctcgagaaggtgccgaccgacccggcccgcgaccgg
gaccggatgctcaccgtgcacgaggtccagcgggagtacgaccagctggtgtcctcgatg
acgatgacgccccagctgcgggagatccgctggatgatcgaggagctgcgggtgggcctg
ttcgcgcaggcgctcgggaccgcctacccggtgtccgacgtgcggatctaccgggcgatg
gacgccttgccggcctga
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