Dactylosporangium sp. AC04546: KZZ52_12065
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Entry
KZZ52_12065 CDS
T10220
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dact Dactylosporangium sp. AC04546
Pathway
dact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KZZ52_12065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dact03019
]
KZZ52_12065
03009 Ribosome biogenesis [BR:
dact03009
]
KZZ52_12065
Enzymes [BR:
dact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KZZ52_12065
Messenger RNA biogenesis [BR:
dact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KZZ52_12065
Ribosome biogenesis [BR:
dact03009
]
Prokaryotic type
rRNA helicases
KZZ52_12065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
WSD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WVK89552
LinkDB
All DBs
Position
2595131..2596843
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AA seq
570 aa
AA seq
DB search
MNDEDTTGFADLGLRDELLKALTGLGYEEPTPIQREAIPPMLAGRDLLGQAATGTGKTAA
FALPLLQNMPAPGGDNPSALVLVPTRELAVQVSEAIHRYGREIGTRVVPIYGGQPIGRQL
RALEQGVDVVVATPGRALDHIGRGTMRLHDLHVVVLDEADEMLDMGFAEDIEAILQETPE
DRQTVLFSATMPPRIEGLARSHLTDPIRIQIGREPTPAGEAPLVRQVAYVVSRAHKPAAL
GRVLDVEAPGAAIVFCRTRDEVDQLTETLNGRGYRAEALHGGMGQEQRDRVMARLRNGTA
DLLVATDVAARGLDVEHLTHVVNYDVPSAPESYVHRIGRVGRAGREGVAITLAEPREHRM
LKTIERVTKQRIAIEKVPTVADLRARRLELTRAALHESLIADRDLERFRVVVETLTDEFD
LMEIALAAVKLAHESGSTGDGDEEEIPEITLRAPREREGERPGERPGRRVSVRDADARGA
RGRERRLPPGGMTRLFVGAGRSAGIRPQDLVGAITGESSLTGRDIGAIEIADRFALVEVP
DQAVDEVIDTLRRTTLKGRRPVVRRERPRP
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgaggacaccaccggcttcgcggacctcggcctgcgcgacgagctgctcaag
gccctgaccgggctcggctacgaggaacccacgcccatccagcgcgaggcgatcccaccc
atgctcgccgggcgcgacctgctcggccaggcggcgaccggcacgggcaagaccgccgcg
ttcgccctgccgctgctgcagaacatgcccgcacccgggggtgacaacccgtcggcgctg
gtgctggtgcccacccgggagctggcggtccaggtgtcggaggcgattcatcggtacggc
agggagatcggcacccgcgtcgtgcccatctacggcggccagccgatcggccggcagctg
cgggcgctggagcagggcgtcgacgtggtggtcgccaccccgggccgggcgctggaccac
atcggccggggcacgatgcgcctgcacgacctgcacgtcgtggtgctcgacgaggccgac
gagatgctcgacatgggcttcgccgaggacatcgaggcgatcctgcaggagaccccggag
gaccggcagacggtgctgttctccgcgaccatgccgccccggatcgagggcctggcccgc
agccacctgaccgacccgatccggatccagatcggccgcgagcccacccccgcgggtgag
gcgccgctggtccgccaggtcgcgtacgtggtgtcccgcgcgcacaagccggcggccctg
gggcgcgtcctcgacgtcgaggcgccgggcgcggcgatcgtgttctgccgcacgcgcgac
gaggtcgaccagctcaccgagacgctgaacggccgggggtaccgtgcggaggccctccac
ggcggcatgggccaggagcagcgcgaccgggtgatggcccggctgcgcaacggcaccgct
gacctgctggtcgcgaccgatgtcgccgcccgcgggctggacgtcgagcacctgacccac
gtggtcaactacgacgtgccgtcggccccggagtcgtacgtgcaccgcatcggccgggtc
ggccgggccggccgcgagggtgtcgccatcaccctggccgagccgcgcgagcaccggatg
ctcaagaccatcgagcgggtcaccaagcagcggatcgcgatcgagaaggtgccgaccgtc
gccgacctgcgggcccggcgcctggagctgacccgcgcggccctgcacgagagcctcatc
gccgaccgcgacctggagcgcttccgggtggtcgtggagacgctcacggacgagttcgac
ctgatggagatcgcgctcgccgcggtgaagctggcgcacgagtcgggcagcaccggtgac
ggcgacgaggaggagatccccgagatcaccctccgggcgccgcgcgagcgcgagggcgag
cggcccggcgagcggcccggccggcgggtcagcgtccgcgacgccgacgcccgcggcgcc
cggggccgcgagcggcgcctcccgccgggcgggatgaccaggctgttcgtcggggccggc
cgcagcgccgggatccgcccgcaggacctggtgggcgcgatcaccggcgagtcgagcctg
accggccgcgacatcggcgcgatcgagatcgccgaccggttcgcgctggtcgaggtgccg
gaccaggccgtcgacgaggtgatcgacacgctgcgccgcacgaccctcaagggccgccgc
ccggtggtccgccgcgagcgcccgcgcccctag
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