Dactylosporangium sp. AC04546: KZZ52_53840
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Entry
KZZ52_53840 CDS
T10220
Name
(GenBank) ATP-dependent helicase C-terminal domain-containing protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
dact Dactylosporangium sp. AC04546
Brite
KEGG Orthology (KO) [BR:
dact00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dact03019
]
KZZ52_53840
Enzymes [BR:
dact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KZZ52_53840
Messenger RNA biogenesis [BR:
dact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KZZ52_53840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
ResIII
Cas3-like_C_2
Flavi_DEAD
AAA_16
Motif
Other DBs
NCBI-ProteinID:
WVK82738
LinkDB
All DBs
Position
11750148..11752454
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AA seq
768 aa
AA seq
DB search
MQALPVVPAIPRLLEALDQGAAVLVAPPGSGKTTLVPLALDEHLQDGRILVAEPRRIAAR
AAARRMAQLRGEQVGDSVGYAVRGDRRTGPRTRVEVVTTGLLVQRLLADPELPGVSAVVL
DECHERQLDTDLAFAFLIEARATIRSDLRLLATSATAEAERFADKLAGTVVAAEGGLFPF
DVRWVPPRQPMRPAEGMRVDRGFLDHVGATVRKAWNETAGDILVFLPGAAEIEQVRRQLG
DAVVLHGRLPAAQQDQALVKTGTERRIVLATDVAESSLTVPGVRVVVDAGLRRVPRIDLA
RGLGRLVTVTAAKANATQRAGRAAREGPGTVYRCWSQADHERRAEQPEPEVATADLTGFA
LALACWGGLHNEALPDQPPEGAMRVARQTLEALGALDADHRVTGRGRRMQRVGAHPRLAR
ALLDGAPLVGARTAAEVVAVLSEETATTIDDLTAVELTPATRSEADRLRRLVEAKAGERG
REHAAGIIAGLAYPEWIAKRRGDGYLMAGGTEATLPRNSALTGEQWLAIAAADRPQGSVN
ARIRLAAPIDEETARAAGQALLSTVDEVSATGALRVERLGAITLTEQRIDAPDLVSRARN
EARRRRGLPWTPLRRRMAFLHRALGAPWPDVSDDDNLADGEVDHVLQAMLPWPAAKDLDK
LAPERLAVPSGSMRRVDYTDTERPVLTVKVQEAFGWLETPTVAGVQVVLHLLSPAERPVA
VTQDLASFWRNGYPQVRAELRGRYPRHPWPEDPLTAEPTRRTKQSRTK
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggcattgcccgtggtcccggcgattccgcggctgctcgaagcgctcgaccagggg
gccgcggtgctcgtggcgccgcccgggagcgggaagaccacgctcgtgccgctcgcgctc
gacgagcatctccaggacgggcgcatcctggtggccgagccgcggcggatcgcggcccgg
gccgccgcgcggcggatggcccagctcagaggtgagcaggtcggggacagcgtcggatac
gccgtgcgcggggaccgcaggaccgggcccaggacgcgggtcgaggtcgtcaccaccggg
ctgctcgtgcagcggctgctcgccgatccggagctcccgggggtgtccgccgtggtgctc
gacgagtgtcacgagcggcagctggacaccgacctcgcgttcgcgttcctgatcgaggcg
cgggccaccatccgctccgacctgcggctgctggccacctcggccacggccgaggccgag
cggttcgcggacaagctcgccggcacggtcgtcgcggccgagggcgggctgtttccgttc
gacgtccgatgggtgccgcccaggcagccgatgcggccggccgaggggatgcgggtcgac
cgcgggtttctcgaccatgtcggggccaccgtccgaaaggcgtggaacgagaccgccggg
gacatcctggtgttcctgcccggcgcggcggagatcgaacaggtccggcggcagctcggc
gacgccgtcgtcctgcacggacggcttccggccgcgcagcaggaccaggcgctcgtgaag
actggcaccgaacgccgcatcgtgctcgccaccgacgtcgccgagagcagcctcaccgtc
cccggcgtcagggtcgtggtcgacgccgggctccggagggtgccgcggatcgacctcgcc
cgtgggctggggaggctggtgaccgtcaccgccgccaaggcgaacgccacccagcgggcc
gggcgggcggcccgcgaggggccggggaccgtgtaccggtgctggtcccaggccgaccac
gaacggcgggccgagcagcccgagcccgaggtggccaccgccgacctcaccgggttcgcg
ctcgcgctcgcctgctggggcggcctgcacaacgaggcgctgcccgaccagccgcccgag
ggggcgatgcgggtggcgcggcagacgctcgaagccctcggcgccctcgacgcggaccac
cgggtgaccgggcggggccgccggatgcagcgggtcggcgcccacccgcggctcgcccgc
gccctgctcgacggcgcaccactggtcggcgcgcggaccgcggccgaggtcgttgccgtg
ctgagcgaggagacggccacgacgatcgacgacctgacggcggtcgagctgacgcccgcg
accaggtccgaggccgaccgcctgcgccgcctcgtcgaggcgaaggccggggagcgaggc
cgggagcacgccgccgggatcatcgccggcctcgcctacccggaatggatcgccaagcgg
cgcggcgacggctacctcatggccggcggcaccgaagcgaccctgcccaggaactccgcg
ctgacgggcgagcagtggctggcgatcgccgccgccgaccgtccacaggggagcgtcaac
gcccggatcaggctggccgctccgatcgacgaggagaccgcgcgggcggccgggcaggcg
ctgctgtccaccgtggacgaggtgagcgcgaccggcgccctgcgggtcgagcggctcggc
gccatcaccctcacagagcagcgcatcgacgcgcccgacctcgtctccagggcccgcaac
gaagccaggcgcaggcgcggcctgccgtggacgccgctgcggcggcggatggcgttcctc
caccgcgcgctcggcgcgccgtggccggacgtgagtgacgacgacaacctggccgacggg
gaggtcgaccacgtcctgcaggcgatgcttccctggccggccgcgaaggacctcgacaag
ctggccccggagcggctcgcggtgccgagtgggtcgatgcgaagggtcgactacaccgac
accgagcgccccgtcctcaccgtgaaggtgcaggaggcgttcggctggctggagacgccg
acggtggccggcgtccaggtcgtcctgcacctgctctcccccgccgagcgcccggtcgcg
gtcacgcaggacctggcctcgttctggcgcaacggctatccgcaggtgcgggccgagctg
cggggccgctatccgcgccacccatggcccgaggacccgctgacggccgagccgacgcgc
cgcacgaagcagagccgcacgaagtaa
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