Dickeya ananatis: V6C41_06110
Help
Entry
V6C41_06110 CDS
T11170
Symbol
pelB
Name
(GenBank) pectate lyase PelB
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dad Dickeya ananatis
Pathway
dad00040
Pentose and glucuronate interconversions
dad01100
Metabolic pathways
dad02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
V6C41_06110 (pelB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6C41_06110 (pelB)
Enzymes [BR:
dad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
V6C41_06110 (pelB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
XKY19409
LinkDB
All DBs
Position
1360920..1362047
Genome browser
AA seq
375 aa
AA seq
DB search
MKSFITPIAAGLLLVFSQSSLAADTGGYTKTDGGNVTGAVSKTAASMQDIVDIINAAKVD
ANGKKVKGGAYPLIITYTGNEDSLINAAAANICGQWSKDARGVEIKDFTKGITLIGANGS
SANFGIWIVNSSDVVVRNMRIGYLPGGAQDGDMFRIDNSPNVWLDHNELFAANHECDGTK
DGDTTFESAFDIKKGATYVTISYNYIHGVKKVGLAGFSSSDSAERNITYHHNIYNDVNAR
LPLQRGGNVHAYNNLYTNVTSSGLNVRQNGKALIENNWFENAVSPVTSRYDGSNFGTWVL
KNNNITKPADFATYNITWTADTKAYVNADSWTSTGTYPTVPYSYSPVSAQCVKDKLASYA
GVGKNLATLTSAACK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcattcattactcccattgccgccggtctgctgctggtattcagtcaatccagc
ctggctgcggataccggcggttataccaaaacggacggtggtaacgtcacaggtgcggtc
agcaaaacagccgcgtccatgcaagatattgtggatatcatcaatgccgccaaagtggat
gccaacggtaaaaaagtgaaaggcggtgcctacccgctgatcatcacctataccggtaac
gaagacagtctgatcaacgcggcagccgccaatatttgcggccagtggagcaaagatgcc
cgtggcgtggaaatcaaagacttcaccaaaggtatcaccctcattggtgccaatggttct
tccgcgaacttcggtatctggatagtcaattcctccgacgtcgtggtacgcaacatgcgt
atcggctacctgccgggcggtgctcaggatggcgatatgttccgtatcgacaactcgcca
aacgtctggctggatcataacgaactgttcgctgcgaaccacgaatgtgacggtaccaaa
gacggcgacacgacctttgaatccgccttcgatatcaaaaaaggcgctacttacgtcacc
atctcctacaactacatccacggtgtgaagaaggtcggtctggcaggcttcagttcttct
gacagcgctgaacgcaacatcacctaccaccacaacatttacaacgacgtcaacgcccgt
ctgccattgcaacgcgggggtaatgtccatgcgtacaacaacctgtacaccaatgtcacc
agctccggcctgaacgtccgccagaacggcaaagcgctgatcgaaaacaactggttcgaa
aatgcggtaagcccggtaacgtcacgctatgacggcagcaatttcggcacctgggtactg
aagaataacaacatcaccaaaccggccgactttgcgacttacaacattacctggacagcc
gacaccaaggcttacgttaacgccgacagctggacgtccaccggtacctacccgactgtg
ccttacagctacagcccggttagcgcccagtgtgtgaaggacaaactggctagctacgcc
ggggtaggcaagaacctggcaacgctgaccagtgcagcctgtaagtaa
DBGET
integrated database retrieval system
