Dickeya ananatis: V6C41_06455
Help
Entry
V6C41_06455 CDS
T11170
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dad Dickeya ananatis
Pathway
dad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V6C41_06455 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dad03019
]
V6C41_06455 (recQ)
03400 DNA repair and recombination proteins [BR:
dad03400
]
V6C41_06455 (recQ)
Enzymes [BR:
dad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6C41_06455 (recQ)
Messenger RNA biogenesis [BR:
dad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V6C41_06455 (recQ)
DNA repair and recombination proteins [BR:
dad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V6C41_06455 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
XKY19469
LinkDB
All DBs
Position
complement(1445725..1447569)
Genome browser
AA seq
614 aa
AA seq
DB search
MSTADVLNADVLSKEMLAMQVLRETFGYQQFRPGQQDIINAAINGRDCLVIMPTGGGKSL
CYQIPALVLDGLTLVVSPLISLMKDQVDQLQAYGVAAACLNSTQSREQQQAVFNACRCGE
LKLLYIAPERLTTDGFLDQLAHWNTSLIAIDEAHCISQWGHDFRPEYRALGQIKQQCPTL
PIVALTATADDTTRQDIARLLDLRDPLVNVSSFDRPNIRYTLVEKFKPLDQLWLFIHGQR
GKSGIVYCNSRAKVEDLCARLQNRGLSVGAYHAGLENERRAQVQEAFLRDDLQVVVATVA
FGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAALFYDPADMAWLRRCLEEK
PAGMQLDIERHKLNAMGAFAEAQTCRRLVLLNYFGENRQQPCGNCDICLDPPRRYDGLVD
AQKALSCVYRVGQRFGIGYIAEVLRGANNQRIREFGHDKLPVYGLGKDKTQEQWVSILRQ
LIHLGLLAQNIAHHSALQLTESARPVLRGEVPLQLAVPRVASLSKPRASQKSYGGNYDRK
LFAKLRKLRKSIADEDNIPPYVVFSDATLLEMAELLPVTASELLAVNGVGQRKLERFGAP
FMTLIRDHLDNGDD
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtgtctacggcagacgtattgaatgcggacgtattgagtaaagaaatgctggcgatgcag
gtactgcgcgaaaccttcggctaccagcaattccggccgggccagcaggacattatcaat
gccgccatcaacgggcgcgattgcctggtgatcatgccgaccggcggggggaagtccctg
tgttatcagatcccggcgctggtgctggatgggctgacgctggtggtatcgccgttgatt
tccctgatgaaagatcaggtcgatcaattgcaggcctacggcgtggcggcggcgtgcctc
aattcgacccagagtcgtgagcagcagcaggcggtgtttaacgcttgtcgttgtggtgag
ctgaaactgttgtacattgcgccggaacgcctcacgaccgacggttttctggaccaactg
gcgcactggaatacgtcgcttatcgccattgacgaagcgcactgtatttcccagtggggg
cacgacttccgccccgaataccgcgcactggggcagattaagcagcagtgtcccactctg
ccgattgtggcgctgaccgcgaccgctgacgacaccacccgtcaggatatcgcccgtttg
ctggatttacgcgacccgctggtcaatgtcagcagttttgaccgccccaatatccgctac
acgctggtggaaaaattcaaaccgctcgatcaactgtggctgtttatacatgggcagcgt
ggtaagagtggcatcgtgtattgcaacagtcgagcgaaagtcgaagacctgtgtgcccgg
ttgcaaaaccgtgggctgagtgtcggagcctatcacgccgggctggagaacgagcgccgc
gcgcaggtgcaggaggcgtttttgcgcgacgacctgcaggtggtggtggctaccgttgcg
ttcgggatggggatcaataaaccgaacgtccgttttgtggtgcatttcgatatcccacgt
aatatcgagtcctattatcaggaaaccggccgagcggggcgcgatgggttgcccgccgaa
gcggcgctgttttatgacccggcggatatggcctggttgcgtcgttgtctggaagagaaa
ccggcggggatgcaactggatattgaacggcacaagctgaatgcgatgggcgcgtttgcc
gaagcgcaaacctgtcgtcgtctggtgctgctcaattattttggcgaaaatcgtcagcag
ccatgcggtaactgcgatatttgccttgatccgccgcggcgttatgacggactggtggac
gcgcagaaagccttgtcctgtgtttaccgtgtggggcaacggtttgggatcgggtatatc
gctgaagtgctgcgtggtgccaataatcagcgtatccgcgaattcggtcacgacaaattg
ccggtgtacggcctgggtaaggacaaaacccaggagcagtgggtcagtattttgcgtcag
ttgattcatctgggcctgctggcgcaaaacattgcccatcattccgccctgcaactgacc
gagtcggcgcggccggtactgcgcggcgaagtgccgttgcaactggcggtgccgcgtgtt
gccagtttgagtaagccgcgtgccagtcagaagagctacggcggcaattacgaccgtaag
ctgttcgccaagctgcgtaaattgcgtaaatccattgcggatgaagacaatattccgcca
tacgtggtgttcagtgatgccacgctgttggaaatggctgaactgttgccggtgaccgcc
agtgagttgctggcggtcaatggcgtcggtcagcggaaactggagcgatttggtgcccca
tttatgacgttgattcgtgatcatctcgataacggcgacgactga
DBGET
integrated database retrieval system
